| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0212 |
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| Symbol | |
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| ID | 4020670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 242693 |
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| End bp | 243574 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637960391 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_567353 |
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| Protein GI | 91974694 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.156044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAC TGCCCGAAGT CGAAACCGTC CGCCTCGGCC TGACGCCCGC GATGGAAGGG
TTCCGGATCG CGCGGGCGGT GACGAATCGG GACGATCTGC GGTTTCCGCT GCAGAAGGAT
TTTGTCGCGC GGCTGACCGG ACAGATCGTC ACGGGGCTGG GGCGGCGCGC CAAATATCTG
CTGGCCGACC TCGCTTCCGG CGACGTGCTG CTGATGCATC TCGGGATGTC CGGCTCGTTC
CGGGTGGTCG CCGCCGACGG CGCGCACACG CCGGGCGAAT TTCACCATCC GCGCAGCGAG
GACCGCACCC ATGATCATGT GGTGTTCGAC ATGTCGTCCG GCGCGCGGGT GATCTTCAAC
GACCCGCGGC GGTTCGGCTT CATGAAGATC TTTCCGCGCG CCGCCATCGA CGACGAGCCG
CATCTCAAGG GACTCGGCCC CGAGCCGCTC GGCAACGCCT TCGACGCCGT GATGCTGGCG
CGCGCCTGCG CCGGCAAGCA GACCAGCCTG AAGGCGGCGC TGCTGGACCA GCGCGTCGTC
GCCGGGCTCG GCAACATCTA TGTCTGCGAG GCGCTGTGGC GCGCGCATCT GTCCCCCAAG
CGCAAGGCGG CGACGCTCGC CAACCGCAAG AACGAGCCGA CCGATCACGC GCTGCGGCTG
ACCGACGCGA TCCGCGCCGT GCTCGGCGAC GCCATCAAGG CCGGCGGCTC GTCGCTGCGC
GACCACCGCC AGACCTCCGG CGAACTCGGT TACTTCCAGC ATTCCTTCGC CGCCTACGAC
CGCGAAGGCG AACGCTGCCG CACCGACGGC TGCGGCGGCG CCGTGAAGCG CTTCGTGCAG
AACGGCCGCT CGACGTTCTG GTGTTCGGGG TGTCAGAAGT AG
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| Protein sequence | MPELPEVETV RLGLTPAMEG FRIARAVTNR DDLRFPLQKD FVARLTGQIV TGLGRRAKYL
LADLASGDVL LMHLGMSGSF RVVAADGAHT PGEFHHPRSE DRTHDHVVFD MSSGARVIFN
DPRRFGFMKI FPRAAIDDEP HLKGLGPEPL GNAFDAVMLA RACAGKQTSL KAALLDQRVV
AGLGNIYVCE ALWRAHLSPK RKAATLANRK NEPTDHALRL TDAIRAVLGD AIKAGGSSLR
DHRQTSGELG YFQHSFAAYD REGERCRTDG CGGAVKRFVQ NGRSTFWCSG CQK
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