| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0211 |
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| Symbol | ubiE |
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| ID | 4020669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 241721 |
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| End bp | 242482 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960390 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_567352 |
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| Protein GI | 91974693 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.242476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCAGC CGGGCGAGAC CACGCATTTC GGCTTCCGCG ATGTGCCGCT GAACGACAAG
CAGACGATGG TCAACGACGT GTTCCACAGC GTCGCCAGCC GCTACGACCT GATGAACGAC
CTGATGTCGG GCGGCATGCA TCGGTTGTGG AAGGACGTGA TGATCACCAC GCTGAACCCG
CCGCGTGACG ATGCGCCGTT CCGGCTGCTC GATGTCGCCG GCGGCACCGG CGACATCTCG
TTCCGCGCCG CGAAGGCGTC GGGCGCCGGC TTCCAGGCCA CCGTCTGCGA CATCAACACC
GACATGCTCG AGGTCGGCCG CCAGCGCGCC GTGCAGCGCC ATCTCGATGG CCAGGTCGAT
TTCGTCGAAG GCAATGCCGA GGCGTTGCAA TTCCCCGACC GCAGCTACGA CGCCTATACG
ATCGCGTTCG GCATCCGCAA CGTGCCGCGG ATCGATCTGG CGCTCAAGGA AGCCTATCGC
GTGCTGAAGC CGGGCAGCCG CTTCCTCTGT CTGGAGTTTT CCAGCGTCGA CGTGCCGGGC
CTGAACAAGA TCTACGACCT GTTCTCCTTC AAGGTGATCC CGGAGATCGG CCGCGTCGTC
ACCGGCGACG CCGAGAGCTA TCAATATCTG GTCGAGTCGA TCCGTAAGTT TCCGAAGCCC
TATGACTTCG CCGAAATGAT GCGCGACGCC GGCTTCGCGC GGGTCAACTG GCAGATGATG
AGTGGCGGCA TCGTCGCGCT GCATTCGGGC TGGCGTTTGT GA
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| Protein sequence | MNQPGETTHF GFRDVPLNDK QTMVNDVFHS VASRYDLMND LMSGGMHRLW KDVMITTLNP
PRDDAPFRLL DVAGGTGDIS FRAAKASGAG FQATVCDINT DMLEVGRQRA VQRHLDGQVD
FVEGNAEALQ FPDRSYDAYT IAFGIRNVPR IDLALKEAYR VLKPGSRFLC LEFSSVDVPG
LNKIYDLFSF KVIPEIGRVV TGDAESYQYL VESIRKFPKP YDFAEMMRDA GFARVNWQMM
SGGIVALHSG WRL
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