Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0211 |
Symbol | ubiE |
ID | 4020669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 241721 |
End bp | 242482 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637960390 |
Product | ubiquinone/menaquinone biosynthesis methyltransferase |
Protein accession | YP_567352 |
Protein GI | 91974693 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.242476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGC CGGGCGAGAC CACGCATTTC GGCTTCCGCG ATGTGCCGCT GAACGACAAG CAGACGATGG TCAACGACGT GTTCCACAGC GTCGCCAGCC GCTACGACCT GATGAACGAC CTGATGTCGG GCGGCATGCA TCGGTTGTGG AAGGACGTGA TGATCACCAC GCTGAACCCG CCGCGTGACG ATGCGCCGTT CCGGCTGCTC GATGTCGCCG GCGGCACCGG CGACATCTCG TTCCGCGCCG CGAAGGCGTC GGGCGCCGGC TTCCAGGCCA CCGTCTGCGA CATCAACACC GACATGCTCG AGGTCGGCCG CCAGCGCGCC GTGCAGCGCC ATCTCGATGG CCAGGTCGAT TTCGTCGAAG GCAATGCCGA GGCGTTGCAA TTCCCCGACC GCAGCTACGA CGCCTATACG ATCGCGTTCG GCATCCGCAA CGTGCCGCGG ATCGATCTGG CGCTCAAGGA AGCCTATCGC GTGCTGAAGC CGGGCAGCCG CTTCCTCTGT CTGGAGTTTT CCAGCGTCGA CGTGCCGGGC CTGAACAAGA TCTACGACCT GTTCTCCTTC AAGGTGATCC CGGAGATCGG CCGCGTCGTC ACCGGCGACG CCGAGAGCTA TCAATATCTG GTCGAGTCGA TCCGTAAGTT TCCGAAGCCC TATGACTTCG CCGAAATGAT GCGCGACGCC GGCTTCGCGC GGGTCAACTG GCAGATGATG AGTGGCGGCA TCGTCGCGCT GCATTCGGGC TGGCGTTTGT GA
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Protein sequence | MNQPGETTHF GFRDVPLNDK QTMVNDVFHS VASRYDLMND LMSGGMHRLW KDVMITTLNP PRDDAPFRLL DVAGGTGDIS FRAAKASGAG FQATVCDINT DMLEVGRQRA VQRHLDGQVD FVEGNAEALQ FPDRSYDAYT IAFGIRNVPR IDLALKEAYR VLKPGSRFLC LEFSSVDVPG LNKIYDLFSF KVIPEIGRVV TGDAESYQYL VESIRKFPKP YDFAEMMRDA GFARVNWQMM SGGIVALHSG WRL
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