| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0207 |
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| Symbol | |
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| ID | 4020665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 235444 |
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| End bp | 237957 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960386 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_567348 |
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| Protein GI | 91974689 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.749864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.519956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACG TATTGGGGTC GATGCGTCGG ACCTGCTTGT CGTGCACGTC GCTGGTGCGC
GGCCTTGCGG GCGCTGGCCT TCTCGCGGCG TCGTCGCCCG CCTGGGCGGC TGACGATCCG
CTCGCCACTC TGACGTCCCG CTTCATGTTC GATTTCAACC GCCACGAGCT TGTCACGCTC
GCGATGGCGG CGTCGGTGCT CGGCTTCTCC GTCGTGTCCG CGATCCTGCT GATGCGCACG
CGGCAACGCG CCGCCGCGCA GGAAGCGCAG CTGCGCGCCG ACGTTCAGAC TCTTCAGGCC
GAGTCCGATC GCTTCCGCGC ATTGCTGTTC GCCGAGCCGC AGGTGCTGAT CTCCTGGTCC
GCCGGCGACG ACCGGCCGCA GATCAGCGGC GACACTGCGC TGTTGCTGCC GCAGGAGGTG
GCGAACGCCC AGCCGCAGCG CGTCCTCGCT TTCGGCACAT GGCTGCCGCC GGAACCCGCG
CTGCAGATGG ATCATGCGGT CGACGCGCTG CTCGACAAGG GCGAAGCCTT TCTGCTGCAT
TTAACGACGT CGACCGGCCG TTCGATCGAG GCGATGGGCC GCGCCATCGG TGGTCAGGCG
ATCCTGCGAA TCCGCGAACT GAGCGGCATT CGTCGCGAAC TCGCCGACAT GTCGCGGCGC
TTCAAGTCAC TGCAGGACGA GTCCGAGATG CTGCGGGGCT TCGCCAATGC CGCGCCCTGG
CCGATCTGGA CCCGGCGCGC CTCGGGCGAA CTGAGCTTCG CCAACGCCGC CTATGCGCGC
GCGACCGATG CGGGCAGCGC GGCGGACGCG GTCAATCGCA ATCTCGAACT GCTCGACAGT
AACGACCGCG GCAATCTCGC GCGCGCGCTC AACGACAATG CCCAATTCGC CGCGCGTCTT
CCGATCGTGG TCAGCGGCGA GCGCCGCTAT TTCGACGTTC GCGCGTTGCG GCTGAGCGGC
GGCAGCGCCG GCATCGCGGT GGATGCGAGC GAAGCCGCGG CGCTCGGCGC CGCGTTGGTG
CGGATGGCGG AGGCGCATCG CCGCACGCTC GACCAGTTGT CGTCAGGCGT CGCGGTGTTC
GACGCGCAGC GCCGGCTCGC CTTCTACAAC GATTCCTATC GCAGGCTGTG GGATCTGGAC
CGCGCCTTCC TCGACAGCAA CCCCGACGAT TCCAGCGTGA TCGACCGTTT GCGCGCCGCG
CGCAAACTGC CCGAAGAGCG CGATTTCAGG GAGTGGAAGA AAAAGCTGCA CGAGGCCTAT
CGGGCGGTCG AGCCGGAGAA GGCGATCTGG TATCTGCCCG ACGGCCGCGC GATCAGCATC
GTCACCACGC CCAATCAGGA GGGCGGCGTC ACCTATCTGT TCGACGACGT CACCGAGAGC
CTGGAACTGC AGCGCCGCTA CGGCGGCCTG ATCGATGTCC AGCGCGAGAC GCTCGACAAT
CTGACCGAGG CGGTCGCGGT GTTCGGCAGC AATGGCTGCG CGCAATTGTT CAACCCCGCG
TTCACGCGGA TGTGGAATCT CTCGCCGGAA GCGCTCAACA ACCGGCCGCA TATCGAAACC
GTCGAGGAAT GGTGCCGCCC GCTGTTCGAC GACGCGGTGA GTTGGCAGGC GCTGCGTAGC
GCGATCACCG GAATCGACGA CCGCAAGCAC GTGCTGCTGA AGCTCGAGCG CAAGGACGGC
ACCGTGCTGT CCTGCAAGAC GATGCCGCTG CCCGACGGCG CGACGATGCT GACGTTCCTG
GACATCAGCG ACACCGAGAA TGTCGAGCGC GCCTTGCGGG AGCGCAATGA GGCGCTGGAG
ACGGCCGACC GCATCAAGGT CGATTTCGTC CACCACGTGT CTTACGAATT GCGTTCGCCG
CTGACGACGA TCATCGGCTT CGCGCATCTG CTCGGCGATC CGAGCACCGG TCCGCTCAAC
GACAAGCAGT CCGAATACAT CGCCTACATC ACCTCGTCGA CCAACGCGCT GATGGCGATC
ATCAACAACA TCCTCGATCT CGCCAGCATC GACGCCGGCG CGATGACGCT CAATCTCGGG
CCGATCGATA TCGGTCGCGC GATCGACGCG GCCGCCGAAG GCATTCAGGA TCGCCTCGCG
CGCGATCAGA TCACGCTCGA CGTCGAGATC GATCCCGCGG TCGGCGAATT TGTCGGCGAC
GAACGCCGCG TCGTGCAGGT GCTGTACAAT CTGCTCGCCA ATGCGGTCGG CTTCTCGCCG
AACCAGGCGA CCGTGACGCT CGTGGTCCAC AAGATCGGCG CGAAGGTGGT CTTCACCGTG
ACCGACGCCG GTCCCGGGAT TGCGCCGGAG CTGAAGGACA AGGTGTTCGA CTGGTTCGAG
AGCCACTCCC AGGGCTCGCG GCATCGCGGC CCGGGCCTCG GCCTGGCGCT GGTGCGCTCC
TTCGTCGAAC TGCACGGCGG CAAGGTCCAG GTCGATTCGG TGGTCGGACG CGGCACTTCG
GTGATCTGCG AATTTCCGAT CGAACCGTCC GCGCAGCGCA ACGCCGCCGA ATGA
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| Protein sequence | MSDVLGSMRR TCLSCTSLVR GLAGAGLLAA SSPAWAADDP LATLTSRFMF DFNRHELVTL
AMAASVLGFS VVSAILLMRT RQRAAAQEAQ LRADVQTLQA ESDRFRALLF AEPQVLISWS
AGDDRPQISG DTALLLPQEV ANAQPQRVLA FGTWLPPEPA LQMDHAVDAL LDKGEAFLLH
LTTSTGRSIE AMGRAIGGQA ILRIRELSGI RRELADMSRR FKSLQDESEM LRGFANAAPW
PIWTRRASGE LSFANAAYAR ATDAGSAADA VNRNLELLDS NDRGNLARAL NDNAQFAARL
PIVVSGERRY FDVRALRLSG GSAGIAVDAS EAAALGAALV RMAEAHRRTL DQLSSGVAVF
DAQRRLAFYN DSYRRLWDLD RAFLDSNPDD SSVIDRLRAA RKLPEERDFR EWKKKLHEAY
RAVEPEKAIW YLPDGRAISI VTTPNQEGGV TYLFDDVTES LELQRRYGGL IDVQRETLDN
LTEAVAVFGS NGCAQLFNPA FTRMWNLSPE ALNNRPHIET VEEWCRPLFD DAVSWQALRS
AITGIDDRKH VLLKLERKDG TVLSCKTMPL PDGATMLTFL DISDTENVER ALRERNEALE
TADRIKVDFV HHVSYELRSP LTTIIGFAHL LGDPSTGPLN DKQSEYIAYI TSSTNALMAI
INNILDLASI DAGAMTLNLG PIDIGRAIDA AAEGIQDRLA RDQITLDVEI DPAVGEFVGD
ERRVVQVLYN LLANAVGFSP NQATVTLVVH KIGAKVVFTV TDAGPGIAPE LKDKVFDWFE
SHSQGSRHRG PGLGLALVRS FVELHGGKVQ VDSVVGRGTS VICEFPIEPS AQRNAAE
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