Gene RPD_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0201 
Symbol 
ID4020659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp225390 
End bp225710 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content63% 
IMG OID637960380 
Productthioredoxin 
Protein accessionYP_567342 
Protein GI91974683 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTG GCAAGGTGTC TGACGCCGAT TTCGAAACCG AGGTTCTCAA GGCGCAGGGC 
CCCGTTGTGG TGGATTTCTG GGCCGAGTGG TGCGGCCCGT GCCGCATGAT CGCGCCGGCG
CTCGACGAAA TCTCCGGCGC GATGGGCGAC AAGGTCAAGA TCGTGAAGCT CAATGTTGAC
GAGAGCCCGG TCACCGCGTC GAAATACGGC GTGATGTCGA TCCCGACGCT GATGATCTTC
AAGGGCGGCG AGATGGCCTC GCGCCAGGTC GGCGCCGCAC CGAAAGCCAA GCTGCAGCAG
TGGATCAGCT CGGCGGTCTG A
 
Protein sequence
MSVGKVSDAD FETEVLKAQG PVVVDFWAEW CGPCRMIAPA LDEISGAMGD KVKIVKLNVD 
ESPVTASKYG VMSIPTLMIF KGGEMASRQV GAAPKAKLQQ WISSAV