Gene RPD_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0199 
Symbol 
ID4020657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp222727 
End bp223695 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID637960378 
Productacetyl-CoA carboxylase subunit beta 
Protein accessionYP_567340 
Protein GI91974681 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.694841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGT TGACCAACGT CGTCCGTCCG AAGATCCGCA ACATCCTGCG GCGCGAGACT 
CCGGAGAATC TCTGGATCAA ATGTCCGGAT ACCGGGCAGT TGGTGTTCTA CAAGGACGTC
GAGCAGAACC AGTTCGTCAT TCCCGGCTCG AACTATCACA TGCGCATGGG CGCGTTGGCG
CGGCTGCGGT CGGTTTTCGA CAACGAGACC TGGTATGACG TCGCGCTTCC GGAAGTCACC
GCCGACCCGC TGAAATTCCG GGACGAGCGA AAATATGCCG ACCGCATCAA GGATGCCCGC
ACCAAGACCG GCGCCCATGA CGCGGTCAAG GTCGGCTACG GCAAGCTCGA AGGCCTCGGC
GTTGTCGCCG CCGTGCAGGA CTTCGATTTC ATGGGCGGCT CGCTCGGCAT GGCGGCCGGC
GAAGCGATCA TCCGTGGACT GGAGCTTGCG GTCGAGAAAC ACGCGCCCTT CATCATGTTC
GCGGCCTCCG GCGGCGCGCG GATGCAGGAA GGCATCCTGT CGCTGATGCA GATGCCGCGC
ACCACGGTGG CTGTGCAGAT GCTGCGCGAG GCCGGGTTGC CCTACATCGT GGTGCTGACC
AATCCGACCA CCGGCGGCGT CACCGCGTCT TACGCGATGC TCGGCGACAT CCAACTCGCC
GAGCCGGGCG CACTGATCGG CTTTGCCGGC GCCCGCGTGA TCGAACAGAC CATCCGCGAG
AAGTTGCCGG ACGGCTTCCA GCGCGCCGAA TATCTCAGGG ACCACGGCAT GGTCGACATG
GTCGTGCATC GCCACGAACT GCGCCCTACG CTGGCGCGGC TGTGCCGAAT CCTCACCAAG
ACGCCACTGC CCGCTGTGGA AGAAATCGCG GCATCCGACG ATGCGGCCCA GGATGCGGAA
GCCGCGGCGG CGACCGAAAT CGTCGTGACG CCGCCTGAAG CGCCGTCGCC GACCGCGCCG
CAGGCGTGA
 
Protein sequence
MNWLTNVVRP KIRNILRRET PENLWIKCPD TGQLVFYKDV EQNQFVIPGS NYHMRMGALA 
RLRSVFDNET WYDVALPEVT ADPLKFRDER KYADRIKDAR TKTGAHDAVK VGYGKLEGLG
VVAAVQDFDF MGGSLGMAAG EAIIRGLELA VEKHAPFIMF AASGGARMQE GILSLMQMPR
TTVAVQMLRE AGLPYIVVLT NPTTGGVTAS YAMLGDIQLA EPGALIGFAG ARVIEQTIRE
KLPDGFQRAE YLRDHGMVDM VVHRHELRPT LARLCRILTK TPLPAVEEIA ASDDAAQDAE
AAAATEIVVT PPEAPSPTAP QA