Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0197 |
Symbol | |
ID | 4020655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 220569 |
End bp | 221783 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960376 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_567338 |
Protein GI | 91974679 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGA TCCTGCCGAA TTCGTTTCGA TCCGGTCCCG ACGAGCGCGG GCATTTCGGC ATTTTCGGCG GCCGCTTCGT CGCCGAGACG TTGATGCCGC TGATCCTGGA GCTGGAAAAG GCCTACGCTG AGGCAAAAGA CGATCCGGCG TTTCGCACCG AGATGGACGG CTATCTCAAG CATTATGTCG GCCGGCCGTC GCCGCTGTAT TTCGCCGAGC GGCTGACCGA GCATTTCGGC GGCGCCAAGA TCTACTTCAA GCGCGAGGAT CTCAATCACA CCGGCGCCCA CAAGGTGAAC AACGTGCTCG GCCAGATCAT GCTGGCCAGG CGGATGGGCA AGCAGCGGAT CATCGCCGAG ACCGGCGCCG GCATGCACGG CGTCGCCACC GCCACGATGT GCGCCAAGTT CGGCCTGCAA TGCGTGGTCT ATATGGGCGC GGTCGACGTC GAGCGGCAGC AGCCCAATGT GCTGCGGATG AAGGCGCTGG GCGCCGAAGT CCGCCCGGTG ACCTCCGGCG CCAACACGCT GAAGGACGCG ATGAACGAGG CGCTGCGGGA CTGGGTCACC AACGTTCACG ACACCTTCTA CTGCATCGGC ACCGTCGCGG GCCCGCACCC CTATCCGATG ATGGTGCGCG ACTTCCAGGA GGTGATCGGC CAGGAGGTGC GCGAGCAGAT TCTGGAGACC GAAGGCCGGC TGCCGGATTC GCTGATCGCC TGCATCGGCG GCGGCTCCAA CGCGATGGGC CTGTTTCACC CCTTCCTCGA CGACGCCGGC GTCGTGATCT ACGGCGTCGA AGCCGCGGGC CATGGCCTCA GCAAGCTGCA TGCGGCGTCG ATCGCCGGCG GCAAGCCCGG CGTGCTGCAC GGCAATCGCA CCTATCTGCT GATGGACGAT GACGGCCAGA TCCAGGAAGC GCATTCGATT TCCGCCGGCC TCGACTATCC CGGCATCGGC CCCGAGCACG CCTGGCTGCA CGATGTCGGC CGCGTCAACT TCCTGTCGGC CACCGACGCC GAGGCGCTCG ACGCCTTCAA GCTGTGCTGC CGTCTCGAGG GCATCATTCC GGCGCTGGAG CCGGCGCATG CGCTGGCCAA GGTCGCCGAT CTCGCGCCGA TCCTGCCGAA GGATCACTTG ATGGTGCTCA ACATGTCCGG CCGCGGCGAC AAGGATCTCG CTTCTGTGGC CGAGCATCTC GGGGGCAAGT TCTGA
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Protein sequence | MNQILPNSFR SGPDERGHFG IFGGRFVAET LMPLILELEK AYAEAKDDPA FRTEMDGYLK HYVGRPSPLY FAERLTEHFG GAKIYFKRED LNHTGAHKVN NVLGQIMLAR RMGKQRIIAE TGAGMHGVAT ATMCAKFGLQ CVVYMGAVDV ERQQPNVLRM KALGAEVRPV TSGANTLKDA MNEALRDWVT NVHDTFYCIG TVAGPHPYPM MVRDFQEVIG QEVREQILET EGRLPDSLIA CIGGGSNAMG LFHPFLDDAG VVIYGVEAAG HGLSKLHAAS IAGGKPGVLH GNRTYLLMDD DGQIQEAHSI SAGLDYPGIG PEHAWLHDVG RVNFLSATDA EALDAFKLCC RLEGIIPALE PAHALAKVAD LAPILPKDHL MVLNMSGRGD KDLASVAEHL GGKF
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