Gene RPD_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0196 
Symbol 
ID4020654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp219911 
End bp220567 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID637960375 
ProductN-(5'-phosphoribosyl)anthranilate isomerase 
Protein accessionYP_567337 
Protein GI91974678 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCG TCGTCAAAAT CTGCGGCCTG TCGACCTGCG ACACGCTCGA AGCGGCGGTC 
GCTGCCGGCG CCGACATGGT CGGCTTCGTG TTCTTTCCCG CTTCGCCGCG CCACGTCGGG
CTCGACGTCG CCAGAGAACT CAGCGACCAG GTCGGCAGTC GCGCGGCGAA AGTGGCGCTG
ACCGTCGACG CCAGCGACGC GCTGATCCGC GACATCGTCG AGATCCTCAA GCCTGACCTA
TTGCAATTGC ACGGCAGCGA GAGCCCCGAA CGGGTTCGCG CGCTGAAGCA GGCCTTTGGG
TTGCCGGTGA TGAAGGCGAT CGCGGTGGCG ACCGCAGCCG ATCTGGCGAT GCTGCCGGCC
TACGCCGAGA CCGCCGATCG CATCCTGTTC GACGCGCGAC CGCCGAAAGA CGCCACCCGC
CCGGGCGGCC TCGGCATGAC CTTCGATTGG GAGCTGCTGC GCGATCTCGA CCTGTCGCTC
CCCTTCATGG TGTCCGGCGG CGTCAATCCG GGAAATGTCG CGGCAGCGCT GCGGGTGACC
GGGGCCGGCG GCGTCGACGT GTCGTCCGGC GTCGAACGTG CGCCCGGCGC CAAGGACCCC
GAATTGATCC GCAGCTTCAT CCGCGCCGCG CGCGCCAGCG AAGAGTTGAT GACCTGA
 
Protein sequence
MSVVVKICGL STCDTLEAAV AAGADMVGFV FFPASPRHVG LDVARELSDQ VGSRAAKVAL 
TVDASDALIR DIVEILKPDL LQLHGSESPE RVRALKQAFG LPVMKAIAVA TAADLAMLPA
YAETADRILF DARPPKDATR PGGLGMTFDW ELLRDLDLSL PFMVSGGVNP GNVAAALRVT
GAGGVDVSSG VERAPGAKDP ELIRSFIRAA RASEELMT