| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0192 |
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| Symbol | rpsA |
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| ID | 4020650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 216049 |
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| End bp | 217746 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960371 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_567333 |
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| Protein GI | 91974674 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0782699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGA CTGATACTTA CAACCCGACC CGCGACGATT TCGCCGCGAT GCTCGACGAG
TCCTTTGCCG GCGGCAATCT GCAGGAAAGC TCGGTCATCA AGGGCATCGT CGTTGCGATC
GAAAAGGACA TGGCCGTCAT CGACGTCGGC CTGAAGACCG AAGGCCGCGT GGCACTGCGC
GAATTCGCAG GACCCGGCCG TGAAAGCGAA TTGAAGGTCG GCGACACCGT CGAAGTGTTC
CTTGACCGGA TCGAAAATGC GCTCGGCGAA GCCGTTCTGT CGCGCGACAA GGCGCGCCGC
GAAGAGAGCT GGGGCAAGCT CGAGAAGGCC TTCCAGGGCA ACGAGAAGGT GTTCGGCGTC
ATCTTCAACC AGGTCAAGGG CGGCTTCACG GTCGACCTCG ACGGCGCCGT GGCGTTCCTG
CCGCGCTCGC AGGTCGACAT CCGTCCGATC CGCGACGTCG CGCCGCTGAT GAACAACTCG
CAGCCGTTCC AGATCCTCAA GATGGATCGC CGCCGCGGCA ACATCGTGGT GTCGCGCCGC
ACGGTTCTCG AAGAGACCCG CGCCGAGCAG CGCCAGGAGC TGGTGCAGAA CCTCGAAGAG
GGTCAGGTGA TCGACGGCGT CGTCAAGAAC ATCACCGATT ACGGTGCGTT CGTCGACCTC
GGCGGCATCG ACGGCCTGCT GCACGTCACC GACATCGCCT GGCGCCGGGT CAATCACCCG
ACCGAGGTGC TGACGATCGG CCAGACCGTC AAGGTCAAGA TCATCAAGAT CAACCACGAG
ACCCACCGCA TCTCGCTCGG CATGAAGCAA CTGCTGGACG ATCCGTGGCA GGGCATCGAG
GCGAAGTACC CGCTGAACGC GCGCTTCACC GGCCGCGTCA CCAACATCAC CGACTACGGC
GCGTTCGTCG AGCTGGAGCC GGGCATCGAA GGCCTGATCC ACGTCTCGGA GATGTCGTGG
ACCAAGAAGA ACATGCACCC CGGCAAGATC GTTTCGACTT CGCAGGAAGT CGACGTGCAG
GTGCTCGAGG TCGATTCGGT CAAGCGCCGG ATTTCGCTCG GCCTCAAGCA GACCATGCGC
AATCCGTGGG AAGTGTTCGT CGAGAAGTAC CCGGTCGGTT CGACCGTCGA AGGCGAAGTC
AAGAACAAGA CCGAGTTCGG TCTGTTCCTC GGCCTCGACG GCGACGTCGA CGGCATGGTC
CATCTCTCGG ACCTCGACTG GAAGCAGCCG GGCGAGCAGG TGATCGACAA CTTCAAGAAG
GGCGACATGG TCAAGGCCGT GGTGCTCGAC GTCGATGTCG AGAAGGAGCG CATCTCGCTC
GGCGTCAAGC AGCTCGAAGG CGACCCCTTC GCCGAGCCGG GCGACGTCAA GAAGGGCGCG
ATCGTGACCT GCGAAGTGCT GGACGTGAAG GAATCCGGGA TCGACGTGCA GATCGTCGGC
ACCGACTTCG CGACCTTCAT CAAGCGCTCG GAGCTGGCGC GCGACCGCAA CGATCAGCGC
AGCGACCGCT TCGCGGTCGG TGAGAAGGTC GACGCCCGCG TGATCCAGTT CGACAAGAAG
GCCCGCAAGG TCCAGGTGTC GATCAAGGCG CTCGAAGTCG CCGAAGAGAA GGAAGCCATC
GCGCAATACG GCTCGTCCGA TTCGGGCGCG ACGCTGGGCG ACATCCTCGG CACCGCGCTC
AAGCAGCGCG ACAAGTAA
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| Protein sequence | MASTDTYNPT RDDFAAMLDE SFAGGNLQES SVIKGIVVAI EKDMAVIDVG LKTEGRVALR
EFAGPGRESE LKVGDTVEVF LDRIENALGE AVLSRDKARR EESWGKLEKA FQGNEKVFGV
IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVAPLMNNS QPFQILKMDR RRGNIVVSRR
TVLEETRAEQ RQELVQNLEE GQVIDGVVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP
TEVLTIGQTV KVKIIKINHE THRISLGMKQ LLDDPWQGIE AKYPLNARFT GRVTNITDYG
AFVELEPGIE GLIHVSEMSW TKKNMHPGKI VSTSQEVDVQ VLEVDSVKRR ISLGLKQTMR
NPWEVFVEKY PVGSTVEGEV KNKTEFGLFL GLDGDVDGMV HLSDLDWKQP GEQVIDNFKK
GDMVKAVVLD VDVEKERISL GVKQLEGDPF AEPGDVKKGA IVTCEVLDVK ESGIDVQIVG
TDFATFIKRS ELARDRNDQR SDRFAVGEKV DARVIQFDKK ARKVQVSIKA LEVAEEKEAI
AQYGSSDSGA TLGDILGTAL KQRDK
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