| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0189 |
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| Symbol | |
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| ID | 4020647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 212916 |
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| End bp | 214253 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960368 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_567330 |
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| Protein GI | 91974671 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCATT CAGACCAAAC CTCACCGCTC GAGGCGCGCA AGAGCGCAGC GCTGAGCGGG
ACTGCCCGCG TGCCCGGGGA CAAGTCGATT TCCCACCGCG CCCTGATTCT CGGGGCGCTC
GCGGTCGGCG AGACCCGGAT TTCCGGTCTG CTCGAGGGAC AGGACGTGAT CGATACTGGC
AAGGCGATGC GTGCGCTGGG CGCCCGGGTC GAGCGCACCG GCGAATTCGC CTGGACGGTC
CGCGGCGTCG GCGTCGCCGG CTTCGCCCAG CCCGAGGCGC CGCTCGATTT CGGCAATTCC
GGCACCGGCT GCCGGCTGGC GATGGGCGCT GTCGCCGGCT CGCCGATCAC CGCGACCTTC
GACGGCGACG CCTCGCTGCG CAGCCGGCCG ATGCGGCGGA TCGTCGATCC GCTGGAGCAG
ATGGGCGCCC GGGTGATCCA GAGCCACGAG GGCGGCCGGC TCCCCCTCAC CCTGCAGGGC
GCACGCGACC CGCTGCCGAT CACCTACCGC ACCCCGGTGC CGTCAGCGCA GATCAAGTCG
GCGGTGCTGC TCGCCGGGCT ATCGGCGCCA GGCGTCACCA CCGTGATCGA AGCCGAGGCA
AGCCGCGACC ATACCGAGCT GATGTTGCAG CATTTCGGCG CGACGCTGGT GACGGAGCCG
GAAGGCGCCC ACGGCCGCAA GATTTCCCTG ACCGGCCAGC CCGAGCTGCG CGGCGCCCGG
GTGGTGGTGC CGGCCGACCC GTCGTCAGCC GCGTTCCCGA TGGTCGCCGC GCTGCTGGTG
CCGGGCTCGG ACATCGTGCT GACCGAGGTG ATGACCAACC CGCTGCGGAC CGGCCTGATC
ACGACGCTGC GCGAGATGGG CGGCGCAATT GAGGAGAGCG AAACCCGCGA CGATACAGGG
GAGCCGATGG CGCAATTCCG CATCCGCGGC TCGCGGCTGC GCGGCGTCGA GGTGCCGCCG
GAGCGGGCGC CATCGATGAT CGACGAATAT CTGGTGCTGG CTGTCGCCGC CGCCTTCGCC
GAGGGCACTA CGGTGATGCG CGGTCTGCAC GAGCTGCGGG TCAAGGAATC CGACCGCCTG
GAAGCGACCG CCGATATGCT GCGGGTCAAC GGCGTCAAGG TCGAAATCGT CGGCGACGAT
CTGATCGTCG AGGGCAAGGG CCACGTACCG GGCGGCGGCT TAGTCGCCAC TCACATGGAT
CACCGCATCG CGATGTCGGC GCTGGTGATG GGACTTGCCG CGGACAGGCC GGTCAAGGTC
GACGATACCG CCTTCATCGC CACCAGCTTC CCGGATTTCG TGCCGATGAT GCGGCGGCTG
GGCGGCGAGC TGGCGTAA
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| Protein sequence | MSHSDQTSPL EARKSAALSG TARVPGDKSI SHRALILGAL AVGETRISGL LEGQDVIDTG
KAMRALGARV ERTGEFAWTV RGVGVAGFAQ PEAPLDFGNS GTGCRLAMGA VAGSPITATF
DGDASLRSRP MRRIVDPLEQ MGARVIQSHE GGRLPLTLQG ARDPLPITYR TPVPSAQIKS
AVLLAGLSAP GVTTVIEAEA SRDHTELMLQ HFGATLVTEP EGAHGRKISL TGQPELRGAR
VVVPADPSSA AFPMVAALLV PGSDIVLTEV MTNPLRTGLI TTLREMGGAI EESETRDDTG
EPMAQFRIRG SRLRGVEVPP ERAPSMIDEY LVLAVAAAFA EGTTVMRGLH ELRVKESDRL
EATADMLRVN GVKVEIVGDD LIVEGKGHVP GGGLVATHMD HRIAMSALVM GLAADRPVKV
DDTAFIATSF PDFVPMMRRL GGELA
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