Gene RPD_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0188 
Symbol 
ID4020646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp212363 
End bp212821 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content59% 
IMG OID637960367 
Producthypothetical protein 
Protein accessionYP_567329 
Protein GI91974670 
COG category[S] Function unknown 
COG ID[COG4530] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02300] conserved hypothetical protein TIGR02300 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAACTA GCCAAGTGAA GCACCGTTTT TCAAGAAATC CCAAGGTTGC ACAAGTGGCG 
AAATCCGATC TCGGAACCAA GCGTATTTGC CCGACGACAG GCAAAAAGTT CTACGATCTG
AACAAGAATC CGGTGATCTC GCCCTATACC GGCGAGGTCG TGCCGATTGC GCCGGTGGTG
GCGCCGCGAA CCCGGGCCGA CTCGCGCTCT GCCGCAGCCC CTGCCGCCGC CGAGGCGCCC
GAGGCGATGG AAGCCGAAGA GCTGGTGTCG CTCGAGGAGG CCGATGCCGA AGAGAAGACC
GGCAAGGTCA AGGCGATTGT TCCGGAGTCC GAGGACGATA TCGAAATCGA CGAATCGATC
GAGGATGACG ACGATTCGAC CTTCATCGCC GACGAAGAAG AAGGGGATGA AGACGTCACC
GACATCATTG GTGACGTTTC TGGCGATGAG GAGACTTGA
 
Protein sequence
MATSQVKHRF SRNPKVAQVA KSDLGTKRIC PTTGKKFYDL NKNPVISPYT GEVVPIAPVV 
APRTRADSRS AAAPAAAEAP EAMEAEELVS LEEADAEEKT GKVKAIVPES EDDIEIDESI
EDDDDSTFIA DEEEGDEDVT DIIGDVSGDE ET