Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0188 |
Symbol | |
ID | 4020646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 212363 |
End bp | 212821 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637960367 |
Product | hypothetical protein |
Protein accession | YP_567329 |
Protein GI | 91974670 |
COG category | [S] Function unknown |
COG ID | [COG4530] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02300] conserved hypothetical protein TIGR02300 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAACTA GCCAAGTGAA GCACCGTTTT TCAAGAAATC CCAAGGTTGC ACAAGTGGCG AAATCCGATC TCGGAACCAA GCGTATTTGC CCGACGACAG GCAAAAAGTT CTACGATCTG AACAAGAATC CGGTGATCTC GCCCTATACC GGCGAGGTCG TGCCGATTGC GCCGGTGGTG GCGCCGCGAA CCCGGGCCGA CTCGCGCTCT GCCGCAGCCC CTGCCGCCGC CGAGGCGCCC GAGGCGATGG AAGCCGAAGA GCTGGTGTCG CTCGAGGAGG CCGATGCCGA AGAGAAGACC GGCAAGGTCA AGGCGATTGT TCCGGAGTCC GAGGACGATA TCGAAATCGA CGAATCGATC GAGGATGACG ACGATTCGAC CTTCATCGCC GACGAAGAAG AAGGGGATGA AGACGTCACC GACATCATTG GTGACGTTTC TGGCGATGAG GAGACTTGA
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Protein sequence | MATSQVKHRF SRNPKVAQVA KSDLGTKRIC PTTGKKFYDL NKNPVISPYT GEVVPIAPVV APRTRADSRS AAAPAAAEAP EAMEAEELVS LEEADAEEKT GKVKAIVPES EDDIEIDESI EDDDDSTFIA DEEEGDEDVT DIIGDVSGDE ET
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