| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0186 |
|---|
| Symbol | |
|---|
| ID | 4020643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 209323 |
|---|
| End bp | 210648 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637960364 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_567327 |
|---|
| Protein GI | 91974668 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTC GTTTCTTTGG TCCGACTGCG GCCGCAACCG CGATCGCTGC GACTCTGGCG
ATCGCCACGC CGGCGCATGC GGCGACCGAG ATCCAGTGGT GGCACGCCAT GACCGGCGGC
AACAACGACG TCGTCGTCAA ACTTGCCAAT GACTTCAACG CAGCGCAGAG CGACTACAAG
GTCGTCCCGA GTTACAAAGG CGGCTACGCC GACACGATGA ACGCCGGCAT CGCCGCGTTC
CGCGCCGGCA ACGCGCCGCA TATCATGCAG GTGTTCGAGG TCGGAACCGC CACCATGATG
GCGGCGACCG GCGCGGTGAA GCCGGTCTAC AAATTGATGC AGGAGACCGG CGAACCGTTC
GACGCCAAGG CCTATTTGCC GGCGATCACC GGTTACTACT CGACCTCGAA GGGCGAGATG
CTGTCGTTCC CCTTCAACTC GTCGTCGATG GTGATGTGGG TCAATCTCGA CGCGCTGAAG
AAGGCCGACA TCGCCGAGAT CCCGAAGACA TGGCCCGAAG TGTTCGAGGG CGCCAAGAAG
CTGAAAGCGG CCGGCTATGC CACCTGCGGC TTCTCCACCG CCTGGGTGAC CTGGGCCCAT
GTCGAGCAGT TGTCCGCCTG GCACAACGTG CCGCTGGCGA GCAAGGCGAA CGGTCTCGAC
GGCTTCGACA CCAAGCTTGA ATTCAACGGA CCGGTGCAGG TCAAGCATCT CGACAAGCTG
ATCGAGTTGC AGAAGGACAA GACCTTCGAC TATTCCGGCC GCACCAACAC CGGCGAGGGA
CGCTTCACAT CGGGCGAGTG CCCGCTGTTC CTGACCTCGT CGGGCTTCTT CGGCAACGTC
AAGTCGCAGG CCAAGTTCAA TTGGACCAGC GCGCCGATGC CGTACTACCC GGACGTGAAG
GGCGCCCCGC AGAATTCGAT CATCGGCGGC GCATCGCTGT GGGTGATGGG CGGCAAGACA
CCCGAGGAAT ACAAGGGCGT CGCCAAATTC CTGGCATTCC TGTCCGACAC CGACCGCCAG
GTCGCGGTCC ACAAGGCCTC GGGTTATCTG CCGATCACCA TGGCGGCCTA TGAGAAGGCC
AAGGCCGAGG GCTTCTACAA GGAAGCGCCC TATCTCGAGA CGCCGATCAA GGAACTGACC
AACAAGCCTC CGACCGAGAA TTCGCGCGGC CTGCGGCTCG GCAACATGGT GCAACTGCGC
GACCTGTGGG CCGAGGAGAT CGAACAGGCC CTAGCCGGCA AGAAGACCGC GAAGGAAGCG
CTCGACGCTG CCGTCACCCG CGGCAACACC ATGCTGCGTC AGTTCGAAAA GACCGCGGTG
AAGTAG
|
|---|
| Protein sequence | MAFRFFGPTA AATAIAATLA IATPAHAATE IQWWHAMTGG NNDVVVKLAN DFNAAQSDYK
VVPSYKGGYA DTMNAGIAAF RAGNAPHIMQ VFEVGTATMM AATGAVKPVY KLMQETGEPF
DAKAYLPAIT GYYSTSKGEM LSFPFNSSSM VMWVNLDALK KADIAEIPKT WPEVFEGAKK
LKAAGYATCG FSTAWVTWAH VEQLSAWHNV PLASKANGLD GFDTKLEFNG PVQVKHLDKL
IELQKDKTFD YSGRTNTGEG RFTSGECPLF LTSSGFFGNV KSQAKFNWTS APMPYYPDVK
GAPQNSIIGG ASLWVMGGKT PEEYKGVAKF LAFLSDTDRQ VAVHKASGYL PITMAAYEKA
KAEGFYKEAP YLETPIKELT NKPPTENSRG LRLGNMVQLR DLWAEEIEQA LAGKKTAKEA
LDAAVTRGNT MLRQFEKTAV K
|
|---|
| |