| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0183 |
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| Symbol | ugpC |
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| ID | 4020640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 206368 |
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| End bp | 207462 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960361 |
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| Product | glycerol-3-phosphate transporter ATP-binding subunit |
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| Protein accession | YP_567324 |
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| Protein GI | 91974665 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.65025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCAACG TCGTTCTCCG CAATGTCCGC AAGACCTATC CGGGCGGCTT CGAAGCCATC
AAGGGCGTCG ATCTCGAGGT CGGCGACGGC CAGTTCTGCG TGCTGGTCGG TCCCTCGGGT
TGCGGCAAGT CCACGCTGTT GCGGATGGTG GCGGGGCTGG AAACGATCAC CGCCGGCGAG
ATCGATATCG GCGGTCGCGT CGTCAACGAC GTCGAGCCCG CCGATCGCGA CATCGCGATG
GTGTTCCAGA ACTACGCGCT CTATCCGCAT ATGAGCGTTT ACAACAATAT GGCCTATGGC
TTGCGCAATC GCGGCATGGC GAAGCCGGAG ATCGAGGCGC GGGTGCAGGA GGCGGCGCGG
ATTCTGGAAA TCGGCGCGAT GCTCGACCGC AAGCCGCGGC AACTCTCCGG CGGCCAGCGC
CAGCGCGTCG CCATGGGCCG CGCGATCGTG CGTCAGCCGA AAGTGTTCCT GTTCGACGAG
CCGCTGTCCA ATCTCGACGC CAAGCTGCGG GTGGCGATGC GGGTCGAGAT CCGCAAGCTG
CAGCGCAGGC TCAGCACAAC GGCGATCTAC GTCACCCACG ACCAGCTCGA GGCGATGACG
CTGGCCGACA TTCTGGTGGT GATGAACGCC GGCCAGGTCG AGCAGATCGG CTCGCCCCTC
GACGTCTACG CCAAGCCGGC GACCACCTTC GTCGCCTCCT TCATCGGCGC GCCGCCGATG
AATCTGATCC CGCTCGATGC CGAAGGGGTG CGCGCCCGGT TCGGCGGCGC GGTCACCGAG
GCGGGGGTTC TGGGTGTGCG TCCCGAGGAC CTGGCGATTT CGTCCGAGCC GCCCGCGCCC
GGCGGGCTGA CGCTCGACCT GGCGGTCGAG GCGATCGAGC GGGTCGGTCC GGAAACCTTT
GTCTACGGAA CGCGGTCGCC AGGCGGCGAC CTCGCCGCGA TCAGCAGCAA GCCCGGGGAA
TTGCCGCCCG ACGAGATCAT CATCCGGATC CCGGGCCAGG AGGCTCCAGC CATCGGCCAG
CGGATTTCGG TGGTTGCGCT GCGGCACAAT CTGCATCTGT TCAGCGCCGA CGGCCGCCGG
CGGATCGCCG TCTGA
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| Protein sequence | MANVVLRNVR KTYPGGFEAI KGVDLEVGDG QFCVLVGPSG CGKSTLLRMV AGLETITAGE
IDIGGRVVND VEPADRDIAM VFQNYALYPH MSVYNNMAYG LRNRGMAKPE IEARVQEAAR
ILEIGAMLDR KPRQLSGGQR QRVAMGRAIV RQPKVFLFDE PLSNLDAKLR VAMRVEIRKL
QRRLSTTAIY VTHDQLEAMT LADILVVMNA GQVEQIGSPL DVYAKPATTF VASFIGAPPM
NLIPLDAEGV RARFGGAVTE AGVLGVRPED LAISSEPPAP GGLTLDLAVE AIERVGPETF
VYGTRSPGGD LAAISSKPGE LPPDEIIIRI PGQEAPAIGQ RISVVALRHN LHLFSADGRR
RIAV
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