| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0165 |
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| Symbol | rplT |
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| ID | 4020621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 190501 |
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| End bp | 190860 |
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| Gene Length | 360 bp |
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| Protein Length | 119 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960342 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_567306 |
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| Protein GI | 91974647 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.520303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGCG TCAAACGCGG TGTGACGGCT CACGCCAAGC ATAAGAAGGT CTACAAGCTC
GCCAAGGGTT TCCGTGGCCG CCGCAAGAAT ACGATCCGCG CCGCCAAGGC TGCGGTCGAC
AAGGCCGGCC AATACGCGTT CCGGGATCGC AAGCGCAAGA AGCGGACGTT CCGCGCGCTG
TGGATCCAGC GCATCAACGC CGCGGTGCGT CCGCTCGGCA TGACTTACAG CGTGTTCATC
AACGGCCTCG CCAAATCCGG CGTGATCGTC GATCGCAAGG TGCTGTCGGA TCTGGCGATC
ACCGAACCGG CGGCGTTCCA GGCGATCGCC GAGAAGGCCA AGGCCGCGCT CGCGGCCTGA
|
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| Protein sequence | MARVKRGVTA HAKHKKVYKL AKGFRGRRKN TIRAAKAAVD KAGQYAFRDR KRKKRTFRAL
WIQRINAAVR PLGMTYSVFI NGLAKSGVIV DRKVLSDLAI TEPAAFQAIA EKAKAALAA
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