Gene RPD_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0164 
SymbolpheS 
ID4020620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp189275 
End bp190357 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content65% 
IMG OID637960341 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_567305 
Protein GI91974646 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0740888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATC TCGAAAACCT GCAAACCCAG ATCCTCGCCG ATATCGCCGC TTCGTCCGAC 
GAAGCCGCGC TCGAAGCGGT GCGTGTCGGC GCGCTCGGCA AGAAGGGCTC GATCTCGGCG
TTGCTCGCGA CGCTCGGCAA GATGGACCCC GAGCAGCGCA AGACCGAAGG CGCGGCGATC
AACCTCGCCA AGGAGGCGGT CACGCAGGCG CTGACCGCGC GGCGCGATCT GCTCAAGGCC
GCAGCGCTCG ACGCCAAGCT CGCCGCCGAG ACCATCGACG TGACGTTGCC GCTGCGTGAG
CCGCTGGCGG AGCAGGGCCG GATTCATCCG CTCAGCCAGG TCTGGGACGA ACTCACCGCG
ATCTTCGCCG ATATGGGCTT TGCGATCGCC GAAGGTCCGG ACATCGAGAC CGACGACAAC
AACTTCACCC GGCTGAACTT CCCCGAGGGC CATCCGGCCC GCGAGATGCA CGACACGTTC
TACTTCAATC CGAAGGAAGA CGGCTCGCGC CTGCTGCTGC GCACCCACAC CTCGCCGGTG
CAGGTGCGCA CCATGCTGTC GCAGCGCCCG CCGATCCGGG TGATCTGCCC CGGCCGCACC
TATCGCAGCG ACTCGGACCA GACCCATACG CCGATGTTCC ACCAGGTCGA AGGTCTGGTG
ATCGACAAGG GCAGCCATCT CGGCCATCTG AAATGGATCC TCGCCGAGTT CTGCAAGGCG
TTCTTCGAGG TCGACAACGT CAACATGCGG TTCCGGCCGT CGTTCTTCCC GTTCACCGAG
CCGTCGCTGG AAGTCGACAT CCAGTGCCGC CGCGGCAATG GTGAGATCCG GTTCGGCGAG
GGCGAGGACT GGCTGGAGAT TCTCGGCTGC GGCATGGTCC ACCCCAACGT GCTGACCGCC
TGCGGCATCG ATCCCGAAGT GTATCAGGGC TTCGCCTGGG GCATGGGCAT CGACCGCATC
GCGATGCTGA AATACGGCAT GGCCGATCTG CGGCAATTGT TCGAGGCCGA TTCGCGCTGG
CTCAATCACT ACGGCTTCAA GCCGCTGGAT ATCCCGTCGC TGGCGGGGGG ATTGAGTTCG
TGA
 
Protein sequence
MSNLENLQTQ ILADIAASSD EAALEAVRVG ALGKKGSISA LLATLGKMDP EQRKTEGAAI 
NLAKEAVTQA LTARRDLLKA AALDAKLAAE TIDVTLPLRE PLAEQGRIHP LSQVWDELTA
IFADMGFAIA EGPDIETDDN NFTRLNFPEG HPAREMHDTF YFNPKEDGSR LLLRTHTSPV
QVRTMLSQRP PIRVICPGRT YRSDSDQTHT PMFHQVEGLV IDKGSHLGHL KWILAEFCKA
FFEVDNVNMR FRPSFFPFTE PSLEVDIQCR RGNGEIRFGE GEDWLEILGC GMVHPNVLTA
CGIDPEVYQG FAWGMGIDRI AMLKYGMADL RQLFEADSRW LNHYGFKPLD IPSLAGGLSS