Gene RPD_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0160 
Symbol 
ID4020616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp183064 
End bp184008 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content64% 
IMG OID637960337 
Producthypothetical protein 
Protein accessionYP_567301 
Protein GI91974642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.199424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTTG TGCTCGATGC CATCGGCAAG GTCATTGCCA ACTACCTGCA AAAGGAAGAG 
CCGGGCTACG AGCCGTTCAC GCCGAGCGAT CCTGATCACC TGCGCAGCAT CATGCAGCCC
GGCGACGTGC TGCTGGTCGA AGGCAATGCG CGGATCTCCG GCATCATCAA ATACCTCACG
CAGTCGACCT GGTCGCACGC CGCGCTGTAT GTCGGGCCGA TCGACGGCGC GACCGAGCCC
GACGGCGAGC CGCATGTGCT GATCGAGGCC AATATCGGCG AGGGCGTCTC CTCGTCGCCG
CTGTCGCGGC ATCTGAGCTA TCACACCCGA ATCTGTCGCC CGGTCGGCCT GTCCCACGAG
GACCGCCATA CGGTGTGCCG CTACGCGATC AACCGGATCG GCTTCGGCTA CGACACCAAG
AACATCATCG ATCTGATGCG CTATCTGGTT CCGCTCCCGG TGCCGCAACG CTGGCGCCGG
CGGATGATCG CGCTCGGCTC CGGCGATCCG ACCAAGATCA TCTGCTCGGC GCTGATCGCG
CAGGCGTTCG ACTCGGTGCG CTACCCGATC CTGCCGAAGA TCACCCGCGC CGGCAGCCGC
AAGGCGCGCC GCGAGATCCT GCACATCCGC GATTCGTCGC TGTACATGCC GCGCGACTTC
GACATCTCGC CCTATTTCGA AGTGGTCAAG CCGACCATCA TCAACGGCTT CGACTACACG
GCGCTGCATT GGGCCGACAA GCAGAAGCCG CTCGCGGAGG TGGCGGGCCC GTTCAACACG
TTTCAAGACG ACCTGGAAAA TGCGTCGTCG TTCGCTCCTG AAACGATTGA CGCGGAAGCG
CCGGCAATGG GCGGCGCAAA TCAGGCGCCG GCCGTGATCC TGAGCCGCAC GCACTGGCAA
CATCCAGAGC CCCGCACGCT CGCGCCCCTC GAAGCGTCAT CCTGA
 
Protein sequence
MGVVLDAIGK VIANYLQKEE PGYEPFTPSD PDHLRSIMQP GDVLLVEGNA RISGIIKYLT 
QSTWSHAALY VGPIDGATEP DGEPHVLIEA NIGEGVSSSP LSRHLSYHTR ICRPVGLSHE
DRHTVCRYAI NRIGFGYDTK NIIDLMRYLV PLPVPQRWRR RMIALGSGDP TKIICSALIA
QAFDSVRYPI LPKITRAGSR KARREILHIR DSSLYMPRDF DISPYFEVVK PTIINGFDYT
ALHWADKQKP LAEVAGPFNT FQDDLENASS FAPETIDAEA PAMGGANQAP AVILSRTHWQ
HPEPRTLAPL EASS