Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0129 |
Symbol | |
ID | 4020585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 148537 |
End bp | 149331 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637960306 |
Product | ABC transporter related |
Protein accession | YP_567270 |
Protein GI | 91974611 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCG AGATCGCATC AAGGCCCGCA CCGTCCGCAA CCGACGCGCC TGCCGCCGCG GCGATCGAAG TCGCGCATCT GGTCAAGGTC TACAAGACCA CGCGCGCGGT CGACGATATC TCGTTCCGCG TGCCGCGCGG CAGCATCACC GGGCTGCTCG GCGGCAACGG CGCCGGCAAG ACCACCACGA TATCCATGAT CATGGGGCTG GTGCTGCCGA CCTCGGGCCG CGTCCGGGTG CTCGGCCATG AGATGCCGGA GCGCCGCGCC GACGTGCTCG GCCGGATCAA TTTCGAGAGC CCTTACGTCG ACATGCCGTC GCGGCTGACG GTGCGGCAGA ATCTCATTGT GTTCGGCAAG CTCTACGCGG TGAAGGACCT GCCCGGGCGG ATTGCCGAGC TTGCCGCCGA TCTCGACCTC GGCGAATTCC TCGATCGCGC CAGCGGCAAG CTCTCGGCGG GGCAGAAGAC CCGCGTCGCG CTGGCCAAGG CGCTGATCAA CCGCCCCGAA TTGCTGCTGC TCGACGAGCC GACCGCCTCG CTCGATCCCG ACACCGCCGA CTGGATCCGC TCGCATCTCG AAACCTATCG CAAGCAGCAC GGCGCCTCGA TCCTGCTCGC CTCGCACAAC ATGCTCGAGG TCGAGCGGCT GTGCGACCGC GTCGTGATCA TGAAGCGCGG CCGGATCGAG GACGACGACA GCCCGGCCGC GATCATGGCG CGCTACAACC GCGCGACGCT CGAAGAGGTG TTTCTCGACG TCGCCCGCGG CCGCGCCGCC GGGAGCGGCC GATGA
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Protein sequence | MTLEIASRPA PSATDAPAAA AIEVAHLVKV YKTTRAVDDI SFRVPRGSIT GLLGGNGAGK TTTISMIMGL VLPTSGRVRV LGHEMPERRA DVLGRINFES PYVDMPSRLT VRQNLIVFGK LYAVKDLPGR IAELAADLDL GEFLDRASGK LSAGQKTRVA LAKALINRPE LLLLDEPTAS LDPDTADWIR SHLETYRKQH GASILLASHN MLEVERLCDR VVIMKRGRIE DDDSPAAIMA RYNRATLEEV FLDVARGRAA GSGR
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