Gene RPD_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0128 
Symbol 
ID4020584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp147710 
End bp148540 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID637960305 
Producthypothetical protein 
Protein accessionYP_567269 
Protein GI91974610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.474534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGCC TGATCAACAG CCTCGAACTC GGTCACGGCA TCGCCTGGCA CCGGATCGAA 
GCGATGGTGT TGCGCTATTG GTACCTGCTG CTGTCGTCGT GGCCGCGGTT GCTGGAACTT
GTGTACTGGC CGGCGCTGCA GATCATCACC TGGGGATTTC TGCAGAGCTA CATCGCGCAG
AACGCCGGGT TCTTCGCCCG CGCCGGCGGC ACGCTGATCG GCGCGGTGAT CCTGTGGGAC
ATCCTGTTCC GCGGTCAGCT CGGCTTTTCG ATCTCGTTCC TCGAGGAGAT GTGGGCGCGC
AACCTCGGCA ACCTGATGAT GAGCCCGCTG AAGCCGATCG AATTCCTGGC GTCGCTGATG
ATCATGAGCC TGATCCGGCT GGCGATCGGC ATCGTGCCGA TGACGCTGCT GGCGATGATC
TTCTTCGATT TCAATCTGCT CGGCTTCGGG CTTCCGTTGA TTGCATTCTT CTGCAACCTG
ATCTTCACCA GCTGGGCGCT CGGCATCTTC GTATCGGGGC TGGTGCTGCG CAACGGGCTC
GGCGCCGAGA GCATCGTCTG GACGCTGATG TTCGGCGTGA TGCCGCTCGC TTGCGTGTAC
TATCCGGTGT CGGTGCTGCC GCATTGGCTG CAACTGGTCG CCTGGACGCT GCCGCCGACC
TATGTGTTCG AGGGGATGCG CGCGCTGCTG ATGGAGCATC AGTTCCGCGT CGACCTGATG
CTGTGGTCGC TGGGGCTCAA CGCAGTGCTG TTCGCCGCCG CCTTCATCAG CTTCCTGGTG
ATGCTGAACA GCGCGCGCCG GCACGGATCA TTGATCCAGA CCGGCGAATA G
 
Protein sequence
MRSLINSLEL GHGIAWHRIE AMVLRYWYLL LSSWPRLLEL VYWPALQIIT WGFLQSYIAQ 
NAGFFARAGG TLIGAVILWD ILFRGQLGFS ISFLEEMWAR NLGNLMMSPL KPIEFLASLM
IMSLIRLAIG IVPMTLLAMI FFDFNLLGFG LPLIAFFCNL IFTSWALGIF VSGLVLRNGL
GAESIVWTLM FGVMPLACVY YPVSVLPHWL QLVAWTLPPT YVFEGMRALL MEHQFRVDLM
LWSLGLNAVL FAAAFISFLV MLNSARRHGS LIQTGE