Gene RPD_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0127 
Symbol 
ID4020583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp146905 
End bp147660 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID637960304 
Productmethyltransferase type 12 
Protein accessionYP_567268 
Protein GI91974609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.601101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAATC GGTACGGAAA ACTCGCGTCC TGGGTCTACA ATCTGGACAA GCCGGTCGGC 
CGGTCATTCG GCGACGTGGA ATTTTATCGG CAACGTCTGA AAGACGTTGA CGGCCCCATC
CTGGAGCCCG CCGCAGGCAA CGGCCGGATT CTCGTCCCGC TGCTCGAAGC CGGCCTCCGG
ATCGAAGGCT TCGATGCCTC CGATGAGATG CTCGGCTATT GCCGCGATGA GTGCGGGAAA
CGCCATCTCT CCGCGGGCTT GACCCGGCAG AGGTTCGACG ATTTCTCCTA CGACACGCGT
TTCGCCTCGA TCATCATGCC GGCAGGATCG TTTCAGTTGA TCACCGACGC AGCTTCGGCT
GCCGCCGTGC TGAAGCGATT CCATGATCAT TTGGCTCCGC AAGGGAGATT GATCATCGAC
CTCGATCCCA TCAGCGGCTT CCTCGGCGCT TCCCGCTCGA TTCGTTCGTG GGCCACGGAC
GATGGCGACA TGCTGACCTT GACCGATCAT CGAGTCGAAA CCGACTTCAT CGCGCAGACG
ACGCTGTCCC ACCTTCGCTA TGAGCACTGG CAGGACGGCA GCCTGACCAG AACCGAGCTT
GATCTGTTCA AGCTGCGCTG GTGGGGCGTC AACGAATTTT CGCTCGCATT GCAGGCGGCC
GGCTTCAGCG ACGTCGAGGT GTCGGGCAAT TACCAGCACG GACGCGCGCC GCAACCGGGC
GACGACATCA TCAGCTTCGA GGCGCGCCGG GCATAA
 
Protein sequence
MHNRYGKLAS WVYNLDKPVG RSFGDVEFYR QRLKDVDGPI LEPAAGNGRI LVPLLEAGLR 
IEGFDASDEM LGYCRDECGK RHLSAGLTRQ RFDDFSYDTR FASIIMPAGS FQLITDAASA
AAVLKRFHDH LAPQGRLIID LDPISGFLGA SRSIRSWATD DGDMLTLTDH RVETDFIAQT
TLSHLRYEHW QDGSLTRTEL DLFKLRWWGV NEFSLALQAA GFSDVEVSGN YQHGRAPQPG
DDIISFEARR A