| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0122 |
|---|
| Symbol | |
|---|
| ID | 4020578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 140396 |
|---|
| End bp | 140815 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637960299 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_567263 |
|---|
| Protein GI | 91974604 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.613366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTGG TAGTTTGCAC AGGCTGTCGC GAGGACGTCG CGCAACTAAT CGGTAACCAG
ATCGGCAGTG TTGATCGTTG GTTCGAGCAA CGCGCGCGTC ACTTCGTTCA AAACGCGACA
GACAGACTGC AACGAATCGG AGTCGAATGG CGAGGTGGCG AATATGACCG GATGCGCGTG
ACGTCGGGAG CGCCGCAGCG CGGCGAGAGC ACGATGAGAA CAGAATCCAA TCGCTATTTC
ACCATCGAGC AGCTCGAAGA GCTCGCAGTT GCGAAATACA TCGAGGCGGC GCTGATGCCC
GAGGGCGGCG AGCGCGAGGA ACTGCTGCAG GAGGCCAAGC GCTTCGCCAG CCGCGCAAGG
ATGAAAAGCT GGCTGATGGG CGAAATCGGC ATCACCCCGC CCCGCCGCGA ATATCACTGA
|
|---|
| Protein sequence | MHLVVCTGCR EDVAQLIGNQ IGSVDRWFEQ RARHFVQNAT DRLQRIGVEW RGGEYDRMRV
TSGAPQRGES TMRTESNRYF TIEQLEELAV AKYIEAALMP EGGEREELLQ EAKRFASRAR
MKSWLMGEIG ITPPRREYH
|
|---|
| |