| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0121 |
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| Symbol | |
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| ID | 4020577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 138971 |
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| End bp | 140191 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637960298 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_567262 |
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| Protein GI | 91974603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.455844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCC TGTATCGGGC CGCAGCCGCG GCTGTAGCTG CAATCGCTCT CACAGCCGCG
CCCGCCGCGG CACAGAAGAA ATACGACACC GGCGCCACCG ACACCGAAAT CAAGATCGGC
CAGACCGTGC CGTTCTCCGG TCCCGCTTCG GCCTATGCCG GTATCGGCAA AACCCAGGCC
GCCTATATGC GGATGATCAA CGATTCCGGC GGAATCAATG GCCGCAAGAT CAACCTCATT
CAATATGACG ACGCCTATTC GCCGCCCAAG GCGGTCGAGC AGGTGCGCAA GCTGGTCGAA
GGCGACGAGG TTCTGCTGAC CTTCCAGATC ATCGGGACGC CGTCGAACGC CGCGGTGCAG
AAATATCTCA ACGGCAAGAA GGTGCCGCAG CTGCTCGCCT CGACCGGCGC GACCCGCTTC
ACCGATCCGA AGAGTTTCCC CTGGACGATG GGCTACAACC CGAACTACCA GACCGAAGCC
CGGATCTATG CGCGCTACAT CCTGAAGAAC CACCCCAATG CCAAGATCGG CATCATGTAC
CAGAACGACG ACCTGGGGCG TGATTACCTC GCCGGGCTGA AGGCGGGACT CGGCGACAAG
GCCGCCGCGA TGATCGTGGC GGAGACCTCC TACGAACTGT CCGACCCGAC CGTCGACTCG
CAGATCGTCA AGCTCAAGGC CGCCGGCGTC GACCTCTTCT TCAACGCCTC GACGCCGAAA
TTCGCCGCGC AGGCGATCAA GAAGGTCGCC GACCTCGACT GGCGCCCGAT CCACATTCTC
GACATCAATG CGAGCCCGGT GTCCTCGACG CTGAAACCGG CGGGCCTGGA CATCTCCAAG
GGCATCATCA GCGTCAATTA CGGCAAGGAC CCGGCCGACC CGCAATGGAA GGACGATCCC
GGCGTCGCGA AATATCTCGC CTTCATGGAC AAGTACTATC CGGAGGGTGA CAAGATGTCG
ACGATCAACA CCTACGGCTA CTCGACCGCG CAATTGCTGG TCACCATCCT GAAGCAATGC
GGCGACGACC TCACCCGCGA CAACGTCATG AAACAGGCGG CGAATCTCAA GAACGTGACC
GGCGACCTGT CGCTGCCGGG CATGGTGATC AACACCTCGC CGACCGATTA TCGCATCAAC
AAGCAGCTTC AGATGATGAA GTTCAACGGC GAGCGCTGGG AGCTGTTCGG CCAGATCATC
GAAGACGACC AAGCGATGTA A
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| Protein sequence | MKSLYRAAAA AVAAIALTAA PAAAQKKYDT GATDTEIKIG QTVPFSGPAS AYAGIGKTQA
AYMRMINDSG GINGRKINLI QYDDAYSPPK AVEQVRKLVE GDEVLLTFQI IGTPSNAAVQ
KYLNGKKVPQ LLASTGATRF TDPKSFPWTM GYNPNYQTEA RIYARYILKN HPNAKIGIMY
QNDDLGRDYL AGLKAGLGDK AAAMIVAETS YELSDPTVDS QIVKLKAAGV DLFFNASTPK
FAAQAIKKVA DLDWRPIHIL DINASPVSST LKPAGLDISK GIISVNYGKD PADPQWKDDP
GVAKYLAFMD KYYPEGDKMS TINTYGYSTA QLLVTILKQC GDDLTRDNVM KQAANLKNVT
GDLSLPGMVI NTSPTDYRIN KQLQMMKFNG ERWELFGQII EDDQAM
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