Gene RPD_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0120 
Symbol 
ID4020576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp138274 
End bp138702 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content63% 
IMG OID637960297 
Producthypothetical protein 
Protein accessionYP_567261 
Protein GI91974602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.396245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGT ATATCGATCC GACCAAGGAG GTATTTGCGC AGTTTCGCGA GAATGATCGC 
GACGGCCCGA TCCATATGCT CAATCTGGTG CGGCTGAAGC CGCGCGCCAG CTATCCCGAT
GGCCGCGAGG CGACCGGCGC GGAAGCCTAT GCGGCCTATG GACGTGACTC GCTGTCGGTG
TTCTCGCGCC TGGGCGGCAG AGTGGTCTGG CAGGGCGCGT TCGAACTGAT GCTGATCGGT
CCCCAGCAGG AGAGGTGGGA CCACGTCTTC ATCGCGGAAT ATCCGGGCGT GTCGGCCTTC
GTCGAGATGA TCCGCGATCC GGTATATCGC GAGGCGGTCA AGCATCGCCA GGCCGCAGTC
GAGGATTCCC GGCTGATCCG GCTGAAACCG ATTCCGGCGG GCGAAGGTTT CGGCCAGATT
CCGGAGTGA
 
Protein sequence
MTGYIDPTKE VFAQFRENDR DGPIHMLNLV RLKPRASYPD GREATGAEAY AAYGRDSLSV 
FSRLGGRVVW QGAFELMLIG PQQERWDHVF IAEYPGVSAF VEMIRDPVYR EAVKHRQAAV
EDSRLIRLKP IPAGEGFGQI PE