| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0115 |
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| Symbol | |
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| ID | 4020571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 128620 |
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| End bp | 129606 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960292 |
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| Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
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| Protein accession | YP_567256 |
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| Protein GI | 91974597 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.991586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACA TCTCACGGCG CGCCATCACG GCGCTGATCG CCGCCGCCGC GTTTCTGCCG
GGCGTCCTGC CTGTCGTGGC GTCGGCGGCC GACAAGCCGA AGGAAATCCG GATCGATTGG
GCGACCTATA ATCCGGTCTC GATCGTTCTG AAGCAGCAGG GCCTGCTTGA AAAGGAATTC
GCCAAGGACG GCATCAGCGT CGTCTGGGTG CAGTCGGCCG GCTCCAACAA GGCGCTGGAA
TTCCTCAATG CCGGCTCGAT CGATTTCGGC TCCACCGCCG GTTCGGCGGC TCTGGTCGCC
CGGATCAACG GCAATCCGAT CAAGTCGGTC TATGTCTATT CGCGGCCGGA ATGGACCGCG
CTGGTGACGG CCAAGGATTC CAAGATCGCC TCGGTCGCCG ACCTCAAGGG CAAGCGCGTC
GCGGTGACGC GCGGCACCGA TCCGCACATC TTCCTGGTGC GCGCGCTGCT CGACGCCGGG
CTCAGCCAGA ACGACATCAC GCCGGTGCTG TTGCAGCACG CCGACGGCAA GGCCGCGCTG
ATCCGCGGCG ACGTCGACGC CTGGGCCGGT CTCGATCCGA TGATGGCGCA GGCCGAAGTC
GAGGAGGGCG CGAAGCTGTT CTTCCGCAAG CCTGAAGCCA ACACTTGGGG TATCCTCAAT
GTCCGGGAGC AGTTCCTCAA GGACAATCCC GATCTGGTCC GCCGCGTGCT CGCGGTCTAC
GAGGACGCGC GCAAGTACGC GGTGGCCAAC ACTGACGAGG TGAAGAAGGC GTTCATCGGC
GTCACCAAGC TGCCGGAAAC AGTGGTCGAC AAGCAGCTCA AGGAACGCAC CGAGTTGACG
CATAGCCGGA TCGGCGCGCC GCAGCGCGAC TCGATCCTGG CCGCGGGCCT GGCGCTGCAG
CAGGCCGGGG TGATTCAGTC GTCGGTCGAT GTGAAGGCGA CGCTCGATCA ACTGATCGAC
GACCAGGTCC CGCTGCCGAC CAACTAA
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| Protein sequence | MSNISRRAIT ALIAAAAFLP GVLPVVASAA DKPKEIRIDW ATYNPVSIVL KQQGLLEKEF
AKDGISVVWV QSAGSNKALE FLNAGSIDFG STAGSAALVA RINGNPIKSV YVYSRPEWTA
LVTAKDSKIA SVADLKGKRV AVTRGTDPHI FLVRALLDAG LSQNDITPVL LQHADGKAAL
IRGDVDAWAG LDPMMAQAEV EEGAKLFFRK PEANTWGILN VREQFLKDNP DLVRRVLAVY
EDARKYAVAN TDEVKKAFIG VTKLPETVVD KQLKERTELT HSRIGAPQRD SILAAGLALQ
QAGVIQSSVD VKATLDQLID DQVPLPTN
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