| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0101 |
|---|
| Symbol | |
|---|
| ID | 4020557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 117713 |
|---|
| End bp | 118528 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637960278 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_567242 |
|---|
| Protein GI | 91974583 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.293675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCT GCCTCGCCGC CTTCACCGCG CTCTGCGCCG CGCTGATGTC ACCGGCCTCG
GCGGAGGACG GTTTCCGCGG CAGCGAGTGC CTGGCGATGG CCCAGGCGCC GCCGCGCGTG
ATGCCGGCGA GCCTGCGCCG GCTGGCTGCC GCCGATCAGG TGCTGATCAC CTATCGCGGG
CATTCGACCT ACACGATCGA AAGCCCGGGC GGCGTGATGA TCGCGACCGA TTACAGCGGG
ACCTACGACA CCGGCCGCGC GCCGGACGTC GTCACCATGA ACCGCGCCCA CGCGACGCAC
TACACGCTGT CTCCGGATCG CAACATCGCC CATGTGCTGC ATGGCTGGGG CGAGGACGGC
CAGCCCGCGC GCGTCCGGCT GCAATTCGGC GACGTGCTGA TCCGCAACGT CACCACCGAC
ATCCGCCGCA CCATCTTCGG CGATGGCGCG GGCGGCATGA TCAAGGACGG CAATTCGATC
TTCATCTTCG AGGTCGCAGG CCTGTGCATC GGCCATCTCG GCCATCTGCA CACCATGCTC
GACGACAGTC ATTTCGCGGC GATCGGACGG ATCGACATCC TGATGGTCCC GATCGACGGC
AGCTACACGA TGTCGCTCGA TGGCATCTCG GAGATCACCA AGCGGCTGCG CGCCTCGGTG
GTGTTGCCGA TGCACCGCTT CATGACGCCG CTCGACGAGT TCATGCAGCG CATCGGCAAG
TCGTTCGCGA TCGATCAGCG CGGCGAACGC AGCCTGCGGA TCTCGCGCGA CACCCTGCCA
AGCGCGCCGA CGGTGATTAT ATTGAGGGGA GTTTGA
|
|---|
| Protein sequence | MLRCLAAFTA LCAALMSPAS AEDGFRGSEC LAMAQAPPRV MPASLRRLAA ADQVLITYRG
HSTYTIESPG GVMIATDYSG TYDTGRAPDV VTMNRAHATH YTLSPDRNIA HVLHGWGEDG
QPARVRLQFG DVLIRNVTTD IRRTIFGDGA GGMIKDGNSI FIFEVAGLCI GHLGHLHTML
DDSHFAAIGR IDILMVPIDG SYTMSLDGIS EITKRLRASV VLPMHRFMTP LDEFMQRIGK
SFAIDQRGER SLRISRDTLP SAPTVIILRG V
|
|---|
| |