Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0100 |
Symbol | |
ID | 4020556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 116843 |
End bp | 117604 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637960277 |
Product | 3-demethylubiquinone-9 3-methyltransferase |
Protein accession | YP_567241 |
Protein GI | 91974582 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.294916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGC AATCCGAATC CACCGGCCCC GTCTCGCCCT CCGTCGATCC GGCCGAAATC GCTAAATTCT CCAGGCTGTC GGCGGAATGG TGGGACCCGA CCGGCAAGAT GGCGCCGCTA CACCGGATCA ATCCGCTGCG GATCAGCTTC ATCCGCGACG CCGCCTGCCG CAAATTCGAG CGCAACGCCA AAAGTCTGAG CTGCCTGTCC GGGCTGCGGA TGCTCGACAT CGGCTGCGGC GCCGGCCTGC TGTGCGAGCC GTTCACCCGG CTCGGCGCGC AGGTGATCGG GATCGATCCG TCGGCGACCA ATATCGCGGC CGCCAAGCTG CACGCCGACA AGTCGCATCT GGCGATCGAC TATCGCTGCA CCACGGTGGA GGAGATCGAC CCGCGCGAGC GCTTCGACAT CGTGATGGCG ATGGAAGTGA TCGAACACGT CAACGACGTG CCGGCGTTCC TCGGCCGCTG CGCGGCGCTG ATGAAGCCGA CCGGCATCAT GCTGGTGGCG ACGCTCAACC GCAACTGGAA GAGCTTCGCG CTCGCCATCG TCGGCGCCGA ATATGTGATG CGCTGGCTGC CGCGCGGCAC CCATCAATGG GACAAGTTCG TGACTCCGGA CGAACTCGAG CAGCACCTGC AAGGCCTCGG GCTCGTCGTC ACCGAACAGT CCGGCCTCGT CTTCAACCCG CTCGCCGACC GCTGGCGGCT GTCGCCCGAC ATGGACGTGA ACTACATGGT GGTGGCGGAG ACCGCGCCGT AA
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Protein sequence | MALQSESTGP VSPSVDPAEI AKFSRLSAEW WDPTGKMAPL HRINPLRISF IRDAACRKFE RNAKSLSCLS GLRMLDIGCG AGLLCEPFTR LGAQVIGIDP SATNIAAAKL HADKSHLAID YRCTTVEEID PRERFDIVMA MEVIEHVNDV PAFLGRCAAL MKPTGIMLVA TLNRNWKSFA LAIVGAEYVM RWLPRGTHQW DKFVTPDELE QHLQGLGLVV TEQSGLVFNP LADRWRLSPD MDVNYMVVAE TAP
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