| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0100 |
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| Symbol | |
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| ID | 4020556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 116843 |
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| End bp | 117604 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960277 |
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| Product | 3-demethylubiquinone-9 3-methyltransferase |
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| Protein accession | YP_567241 |
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| Protein GI | 91974582 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.294916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGC AATCCGAATC CACCGGCCCC GTCTCGCCCT CCGTCGATCC GGCCGAAATC
GCTAAATTCT CCAGGCTGTC GGCGGAATGG TGGGACCCGA CCGGCAAGAT GGCGCCGCTA
CACCGGATCA ATCCGCTGCG GATCAGCTTC ATCCGCGACG CCGCCTGCCG CAAATTCGAG
CGCAACGCCA AAAGTCTGAG CTGCCTGTCC GGGCTGCGGA TGCTCGACAT CGGCTGCGGC
GCCGGCCTGC TGTGCGAGCC GTTCACCCGG CTCGGCGCGC AGGTGATCGG GATCGATCCG
TCGGCGACCA ATATCGCGGC CGCCAAGCTG CACGCCGACA AGTCGCATCT GGCGATCGAC
TATCGCTGCA CCACGGTGGA GGAGATCGAC CCGCGCGAGC GCTTCGACAT CGTGATGGCG
ATGGAAGTGA TCGAACACGT CAACGACGTG CCGGCGTTCC TCGGCCGCTG CGCGGCGCTG
ATGAAGCCGA CCGGCATCAT GCTGGTGGCG ACGCTCAACC GCAACTGGAA GAGCTTCGCG
CTCGCCATCG TCGGCGCCGA ATATGTGATG CGCTGGCTGC CGCGCGGCAC CCATCAATGG
GACAAGTTCG TGACTCCGGA CGAACTCGAG CAGCACCTGC AAGGCCTCGG GCTCGTCGTC
ACCGAACAGT CCGGCCTCGT CTTCAACCCG CTCGCCGACC GCTGGCGGCT GTCGCCCGAC
ATGGACGTGA ACTACATGGT GGTGGCGGAG ACCGCGCCGT AA
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| Protein sequence | MALQSESTGP VSPSVDPAEI AKFSRLSAEW WDPTGKMAPL HRINPLRISF IRDAACRKFE
RNAKSLSCLS GLRMLDIGCG AGLLCEPFTR LGAQVIGIDP SATNIAAAKL HADKSHLAID
YRCTTVEEID PRERFDIVMA MEVIEHVNDV PAFLGRCAAL MKPTGIMLVA TLNRNWKSFA
LAIVGAEYVM RWLPRGTHQW DKFVTPDELE QHLQGLGLVV TEQSGLVFNP LADRWRLSPD
MDVNYMVVAE TAP
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