| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0097 |
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| Symbol | prfA |
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| ID | 4020553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 111521 |
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| End bp | 112606 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960274 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_567238 |
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| Protein GI | 91974579 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.208503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC TGCCCGAAGC CAAACTCGAC GTCCTTCTCG CGCATCACGC CTCGCTCGAA
GCGCAACTGC TCGGCGAGGT CGGCGCCAGC GAATATGTGC GGATCACCCG CGAATTGTCC
GAGCTGAACC CGCTGGTCGA GGCGGTGAAG GCGTATCGGG AAGTTCGCGA CGAACTCGGC
GATGTCGACG CGCTGCTCGA GGATCCCGAC ACGGATTCCG AGATGCGGGC GATGGCGGAA
GCCGAACGCG ACGCGCTCGA CGCCCATCGC GCGGAACTGA TCCAGGAAAT CCGCGTCGCA
CTGCTGCCCA AGGATGCGAT GGACGAGCGC AACGTGATGC TGGAAATTCG CGCCGGCACC
GGCGGCGACG AGGCCTCGCT GTTCGCCGGC GACCTGTTCC GGATGTACGA GAAATTCGCC
GCGCTGCAGG GCTGGAGCGT CGAGGTGATT TCGGCCTCCG AAGGCTCGAT GGGCGGCTTC
AAGGAAATCA TCGCCGAGGT GAAGGGCCGC GGCGCGTTCG CCAAGCTGAA GTTCGAATCC
GGCGTGCATC GCGTGCAGCG GGTGCCGGAC ACCGAGACGC AGGGCCGCAT CCACACCTCG
GCCGCGACGG TCGCGGTGTT GCCCGAGGTC GAGGAGGTCG ACGTCGACAT CAAGGCGGAC
GATCTCAAGA TCGACACCAT GCGGGCGCAG GGGGCCGGCG GCCAGCACGT CAACAAGACC
GAATCGGCGA TCCGCATCAC CCATCTGCCG ACCGGCATCG TGGTGATGAT GCAGGACAGC
CGCTCGCAGC ATAAGAACCG CGCCTCGGCG ATGAACATTC TGCGCTCGCG GATCTACGAC
GCCGAGCAGC AGCGCCTCGA TGCCGCGCGC TCGGCCGAGC GCAAGGAGAA GGTCGGATCC
GGCGACCGCT CGGAGCGGAT CCGCACCTAT AATTTTCCGC AGGGCCGGGT CACCGACCAC
CGCATCAATC TGACGCTCTA CAAACTGCCG CAGGTGATCG CCGGCGAGGC GCTGGGCGAA
CTGATCGATG CGCTCACGAC CGAGCACCAG GCCGCCCAGC TCGCGGCGCA GGGCCATGCG
GCCTAG
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| Protein sequence | MSKLPEAKLD VLLAHHASLE AQLLGEVGAS EYVRITRELS ELNPLVEAVK AYREVRDELG
DVDALLEDPD TDSEMRAMAE AERDALDAHR AELIQEIRVA LLPKDAMDER NVMLEIRAGT
GGDEASLFAG DLFRMYEKFA ALQGWSVEVI SASEGSMGGF KEIIAEVKGR GAFAKLKFES
GVHRVQRVPD TETQGRIHTS AATVAVLPEV EEVDVDIKAD DLKIDTMRAQ GAGGQHVNKT
ESAIRITHLP TGIVVMMQDS RSQHKNRASA MNILRSRIYD AEQQRLDAAR SAERKEKVGS
GDRSERIRTY NFPQGRVTDH RINLTLYKLP QVIAGEALGE LIDALTTEHQ AAQLAAQGHA
A
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