Gene RPD_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0092 
Symbol 
ID4020548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp107176 
End bp107604 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content71% 
IMG OID637960269 
Producthypothetical protein 
Protein accessionYP_567233 
Protein GI91974574 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.965626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.113138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCGG CGGCCGAGAT GATTGCGCGG CTGAAGCTGC AGCCGCATCC CGAAGGCGGC 
CATTTTCGCG AGACCTTTCG CGACCCGCGC TGCGACGCCT CCGGCCGCAG CTTCTCGACC
GCGATCTACT TCCTGCTGGC GAGCGGCGAG CGCTCGCACT GGCACCGCAT CGATGCGATC
GAGGTCTGGC ACTATTACGC CGGCGCGGCG CTGGCGTTGG AGATCGCCGA CGCCGACGGC
CATCGCGCGA TTCGGCTCGG CCCCGATGTC GCGGCCGGCG AACAGCCGCA GGCGATCGTG
CCGCCGCACG CCTGGCAGGC TGCGGTCACG ACCGGCGACT GGACCCTGGT CGGCTGCACG
GTGGCGCCCG GCTTCGCGTT CGAGCATTTC GAACTGGCGC CGCCGGACTG GTCGCCGCTT
CGCCGCTGA
 
Protein sequence
MPSAAEMIAR LKLQPHPEGG HFRETFRDPR CDASGRSFST AIYFLLASGE RSHWHRIDAI 
EVWHYYAGAA LALEIADADG HRAIRLGPDV AAGEQPQAIV PPHAWQAAVT TGDWTLVGCT
VAPGFAFEHF ELAPPDWSPL RR