Gene RPD_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0091 
Symbol 
ID4020547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp106399 
End bp107100 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID637960268 
Producthypothetical protein 
Protein accessionYP_567232 
Protein GI91974573 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.121116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGG CCGCACGCAA AGATCTTCGT TTGTCGTCGC AAATCATCGA CCCTGCGATC 
TTGTACTTCG GCACGCCGGT GGTGCTGATC GGATCGTGCA ATGACGACGA CTCGTTCAAT
CTGGCGCCGA TGTCGTCGGC GTGGTGGGTC GGCCAGCGCT GTATGCTCGG GCTGGCGAGC
AATTCCAAGA CCACCGGGAA TATCCTGCGC AGCGGCGAGT GCGTGCTCAA TCTGCCGTCG
TCCGATCTGG TCGGCGCTGT CGACCGCCTG GCGCGCACGA CGGGCTCCGA TCCGGTGCCG
CAGGGCAAGC TCCACCGCGG CTATCGCTTC GAGGCCGACA AATTCGGCGT GAGTCGCCTG
ACGTCGCAGA AGGGCGACGC GGTGGCTGCG CCGCGCGCGC TGGAATGCCC GGTCCAGATC
GAGGCGCGGC TGATGCAGGC TCACCCGATG GCGGAGGAGG ATGTGGTGTG GCGGGGCCAT
CTGGTCGCGC TGGAGCTGAG CGTCGTCCGC ATCCACGTCC ATCCCTCGAT CATGATGGAT
GGACAGGACG ACCGCATCGA TCCCGACAAA TGGCGGCCGC TGATCATGAG CTTTCAGCAA
TATTACGGCC TGGCGCTCGG CAGGCTGCAG CACTCCGTGC TCGGCGAAAT TCCCGAAGCT
TACTATCGGC CGCCATCGCG GCCGTCGCAG CCGGCGGGAT GA
 
Protein sequence
MTLAARKDLR LSSQIIDPAI LYFGTPVVLI GSCNDDDSFN LAPMSSAWWV GQRCMLGLAS 
NSKTTGNILR SGECVLNLPS SDLVGAVDRL ARTTGSDPVP QGKLHRGYRF EADKFGVSRL
TSQKGDAVAA PRALECPVQI EARLMQAHPM AEEDVVWRGH LVALELSVVR IHVHPSIMMD
GQDDRIDPDK WRPLIMSFQQ YYGLALGRLQ HSVLGEIPEA YYRPPSRPSQ PAG