Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0091 |
Symbol | |
ID | 4020547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 106399 |
End bp | 107100 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960268 |
Product | hypothetical protein |
Protein accession | YP_567232 |
Protein GI | 91974573 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.121116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGG CCGCACGCAA AGATCTTCGT TTGTCGTCGC AAATCATCGA CCCTGCGATC TTGTACTTCG GCACGCCGGT GGTGCTGATC GGATCGTGCA ATGACGACGA CTCGTTCAAT CTGGCGCCGA TGTCGTCGGC GTGGTGGGTC GGCCAGCGCT GTATGCTCGG GCTGGCGAGC AATTCCAAGA CCACCGGGAA TATCCTGCGC AGCGGCGAGT GCGTGCTCAA TCTGCCGTCG TCCGATCTGG TCGGCGCTGT CGACCGCCTG GCGCGCACGA CGGGCTCCGA TCCGGTGCCG CAGGGCAAGC TCCACCGCGG CTATCGCTTC GAGGCCGACA AATTCGGCGT GAGTCGCCTG ACGTCGCAGA AGGGCGACGC GGTGGCTGCG CCGCGCGCGC TGGAATGCCC GGTCCAGATC GAGGCGCGGC TGATGCAGGC TCACCCGATG GCGGAGGAGG ATGTGGTGTG GCGGGGCCAT CTGGTCGCGC TGGAGCTGAG CGTCGTCCGC ATCCACGTCC ATCCCTCGAT CATGATGGAT GGACAGGACG ACCGCATCGA TCCCGACAAA TGGCGGCCGC TGATCATGAG CTTTCAGCAA TATTACGGCC TGGCGCTCGG CAGGCTGCAG CACTCCGTGC TCGGCGAAAT TCCCGAAGCT TACTATCGGC CGCCATCGCG GCCGTCGCAG CCGGCGGGAT GA
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Protein sequence | MTLAARKDLR LSSQIIDPAI LYFGTPVVLI GSCNDDDSFN LAPMSSAWWV GQRCMLGLAS NSKTTGNILR SGECVLNLPS SDLVGAVDRL ARTTGSDPVP QGKLHRGYRF EADKFGVSRL TSQKGDAVAA PRALECPVQI EARLMQAHPM AEEDVVWRGH LVALELSVVR IHVHPSIMMD GQDDRIDPDK WRPLIMSFQQ YYGLALGRLQ HSVLGEIPEA YYRPPSRPSQ PAG
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