Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0089 |
Symbol | |
ID | 4020545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 104486 |
End bp | 105418 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637960266 |
Product | NUDIX hydrolase |
Protein accession | YP_567230 |
Protein GI | 91974571 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0736249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCG CGTTTCCGCT CGGCCAGCCG GCTTTCGTCA GCAACATCCT CGACCGCGCC GCGCATCTGC GCGCCGATGA CGCCAGGCTG ATGGCGATGG AGGACCGCAG CGACACCCGC GCCTATGTGG TGCATCGCGA TTCGCTGGTG GTGAAGCACG AGGACGGCGG CCCGCGGGCG CTGCTGTCGA TCAAGGAGGC GCTGGCGCTC GGCGCCAATC CGGGGACGAT CTTTCTCGGC CTGCGCGACG GCGCGGCGGT GTTCGGCATG GGGATCGGCG CGGCGGCGAT CGAGACATTG GTGACCCGCA GCGACGCCGG CATCGCCGAA CTGCGCGGCA TGGCGATGCA GGGGATGCTG CCCGAGGAGC AGCTCTCGGC GATCGCAATG GCGAAGTCGA TGGTGAACTG GCATCAGCGC CACGGCTATT GCGCCAATTG CGGCCAGCGC ACCGCGATGG CGCAGGGCGG CTGGAAGCGC GATTGTCCGG CTTGCAAGGC CGAACACTTT CCGCGCACCG ATCCGGTGGT GATCATGCTG GTGACGTCGG GCGACAAATG CCTGCTCGGC CGCCAGAAGC AGTTTCCCGT CGGGATGTAT TCGTGCCTCG CCGGCTTCGT CGAAGCGGCG GAGACGATCG AGGACGCGGT GTGCCGCGAG ATTCTCGAAG AGTCCGGCAT CCGCTGCGCC GATGTGCGCT ACTACATGAC GCAGCCCTGG CCGTATCCAT CCTCGCTGAT GATCGGTTGT ACGGCGATCG CCACCACCGA GGACATCACC ATCGATTTCA CCGAACTCGA AGATGCGCGC TGGTTCTCGC GCGACGAGGC CGCACAGATG CTCAATCGCC AGCACCCGGA CGGCCTGGTT GGGCCGCACC CGTTCGCGAT CGCGCACCAT CTGGTCGGCC GCTGGCTGGA GCAGGACACA TGA
|
Protein sequence | MSSAFPLGQP AFVSNILDRA AHLRADDARL MAMEDRSDTR AYVVHRDSLV VKHEDGGPRA LLSIKEALAL GANPGTIFLG LRDGAAVFGM GIGAAAIETL VTRSDAGIAE LRGMAMQGML PEEQLSAIAM AKSMVNWHQR HGYCANCGQR TAMAQGGWKR DCPACKAEHF PRTDPVVIML VTSGDKCLLG RQKQFPVGMY SCLAGFVEAA ETIEDAVCRE ILEESGIRCA DVRYYMTQPW PYPSSLMIGC TAIATTEDIT IDFTELEDAR WFSRDEAAQM LNRQHPDGLV GPHPFAIAHH LVGRWLEQDT
|
| |