Gene RPD_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0084 
Symbol 
ID4020539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp100126 
End bp100554 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content67% 
IMG OID637960261 
Producthypothetical protein 
Protein accessionYP_567225 
Protein GI91974566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.441837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0126856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC TGATCCTGAA GCCCTCGATG ATTTTCGCCG CCGTTCTGTC GCTCTCGGCC 
GCGCCCGCAT ACGCGCAGGG CACGGAGAGC CGGGCGGCGC TGCCGAAGCC CATGGCGATG
CAGGTCGGCG ATGTTCTCAA CGGCGAACTC ACCGCGATGC GGTCGCGGGC GAACGGCAAG
GGCAAGAAGA TCCCGGTGTA TCAGCTGACC AGCGAGCCGC GCCGGCTGCC GCCGCCGGCC
GGTCTGTGCA ATCTCGAGAA CGGGCCGGAA ACGTTCCAGA TCGTGCCCGC CGGCGACGCC
CAGGCGGCGC AGCTCAAATC GCATCTCGGC AAGCAGATTG CGCTGAAAGT CGAGGCGGTC
GCCTGTGCCG AGGAGGCCGG GCAGTACAGC GAGGCCGTGG TGACGAAGTG GAGCATGGTC
GCGAAGTAG
 
Protein sequence
MTDLILKPSM IFAAVLSLSA APAYAQGTES RAALPKPMAM QVGDVLNGEL TAMRSRANGK 
GKKIPVYQLT SEPRRLPPPA GLCNLENGPE TFQIVPAGDA QAAQLKSHLG KQIALKVEAV
ACAEEAGQYS EAVVTKWSMV AK