| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0070 |
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| Symbol | engB |
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| ID | 4020525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 86689 |
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| End bp | 87342 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960247 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_567211 |
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| Protein GI | 91974552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00462713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACCGACG CGATCAATCC AACGCTGATC GAACGGGGCC GCAAGGTCTT CGCCGGCGAC
TGGCATTTTA TCTGGGCGTC GCCCTCGATC GAGACGCTGC CGCCGATGGC GGGCATCGAG
GTCGCCTTCG CCGGCCGCTC CAATGTCGGC AAATCCAGCC TGATCAATGC GCTGACCGGC
CGCAATGCGC TGGCGCGGAC CTCCAACACG CCGGGCCGCA CCCAGGAGCT GATCTTCTTC
GACGGCCCAA CGGATGCCGG CCTGCGGCTG GTCGACATGC CGGGCTACGG CTACGCCGCC
GCCTCGAAGG CGAAGGTGGC GTCGTGGACG TCGCTGATCC ACAAATTCCT GCAGGGCCGG
GCCACGCTGG CGCGGGTCTA TGTGCTGATC GACGGCCGCC ACGGCCTCAA GGACGTCGAC
CTCGACATCC TGAAGACGCT CGACAAGTCC GCCGTCAGCT ATCAGATCGT GTTCACCAAA
GCCGACCAGG TCAAAGCCGC CGAGCTCGAA CAGCGGATCG CCGCCACCAA GACCGTGCTG
GCAAAACATC CCGCCGCTTT TCCCGAACTG CTGATGACCT CCTCGCGGAC CGGCGCCGGA
ATGCCCGAGC TGCGCGCGGC GATGATCCGC CTGCTCGACG AACGCGGCGC ATGA
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| Protein sequence | MTDAINPTLI ERGRKVFAGD WHFIWASPSI ETLPPMAGIE VAFAGRSNVG KSSLINALTG
RNALARTSNT PGRTQELIFF DGPTDAGLRL VDMPGYGYAA ASKAKVASWT SLIHKFLQGR
ATLARVYVLI DGRHGLKDVD LDILKTLDKS AVSYQIVFTK ADQVKAAELE QRIAATKTVL
AKHPAAFPEL LMTSSRTGAG MPELRAAMIR LLDERGA
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