Gene RPD_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0068 
Symbol 
ID4020523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp83786 
End bp84514 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content64% 
IMG OID637960245 
Productribonuclease P protein component 
Protein accessionYP_567209 
Protein GI91974550 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.190277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00398675 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTAACG CCGGCTTGGC GAGAATCGGC GGACCGATCC GGCAAAAGCG GCGTCGCGCG 
CAATTGACGA GACCAGGTCG GTCCCGTATA AGCCGCGCCA ACTGTCCGCG ATGGCCCGGC
TCGACCGGGG CGGTTCATTT TTTGGGCTGC TTACGGCTCA TCTGTGAGCC TCATCATCGG
GCTTACCTCA ATCTTCTGAA TAACTTACCC GGCCTGCGGA GAACGACCCG TGAAGCGGAC
TTATCAACCG AGCAAATTGG TGCGCAAGCG CCGTCACGGC TTTCGTGCCC GTCTTGCCAC
CGCTGGTGGC CGAAAGGTGC TGGCGGCGCG CCGCGCCCGC GGACGCAAGC GTCTGAGCGC
CTGAGCGGGC CATCCCGAGA TCAGATCATG GACCGGTTAC GGCAGCGGGC GGACTTCATC
GCCGTTGCCG GCGGGCTGCG GATCAGTGGG CCTGCCTTCG TGCTGCAAGG CCGACGCCGC
GATGACGAAG GCCCGGTCCG GGTCGGGTTC ACCGTGACCA AAAAGATCGG CACCGCGACC
GAGCGCAACC GGATTCGCCG CAGAATGCGC GAATTGGTCA AGCGCGCGGA CCGCAGTTTC
ATGCTGCCAA ACAGCGATTA TGTGCTGGTC GGCCGCCGTG CGGCGTTGAG CCGCGACTTT
GCTGTCATGC TCGGCGATTT GCGCTCCGCG CTCGACCGCA TTGCGCGGCG ATCGTCGAAA
CCGGATTGA
 
Protein sequence
MPNAGLARIG GPIRQKRRRA QLTRPGRSRI SRANCPRWPG STGAVHFLGC LRLICEPHHR 
AYLNLLNNLP GLRRTTREAD LSTEQIGAQA PSRLSCPSCH RWWPKGAGGA PRPRTQASER
LSGPSRDQIM DRLRQRADFI AVAGGLRISG PAFVLQGRRR DDEGPVRVGF TVTKKIGTAT
ERNRIRRRMR ELVKRADRSF MLPNSDYVLV GRRAALSRDF AVMLGDLRSA LDRIARRSSK
PD