Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0068 |
Symbol | |
ID | 4020523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 83786 |
End bp | 84514 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637960245 |
Product | ribonuclease P protein component |
Protein accession | YP_567209 |
Protein GI | 91974550 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0594] RNase P protein component |
TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.190277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00398675 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTAACG CCGGCTTGGC GAGAATCGGC GGACCGATCC GGCAAAAGCG GCGTCGCGCG CAATTGACGA GACCAGGTCG GTCCCGTATA AGCCGCGCCA ACTGTCCGCG ATGGCCCGGC TCGACCGGGG CGGTTCATTT TTTGGGCTGC TTACGGCTCA TCTGTGAGCC TCATCATCGG GCTTACCTCA ATCTTCTGAA TAACTTACCC GGCCTGCGGA GAACGACCCG TGAAGCGGAC TTATCAACCG AGCAAATTGG TGCGCAAGCG CCGTCACGGC TTTCGTGCCC GTCTTGCCAC CGCTGGTGGC CGAAAGGTGC TGGCGGCGCG CCGCGCCCGC GGACGCAAGC GTCTGAGCGC CTGAGCGGGC CATCCCGAGA TCAGATCATG GACCGGTTAC GGCAGCGGGC GGACTTCATC GCCGTTGCCG GCGGGCTGCG GATCAGTGGG CCTGCCTTCG TGCTGCAAGG CCGACGCCGC GATGACGAAG GCCCGGTCCG GGTCGGGTTC ACCGTGACCA AAAAGATCGG CACCGCGACC GAGCGCAACC GGATTCGCCG CAGAATGCGC GAATTGGTCA AGCGCGCGGA CCGCAGTTTC ATGCTGCCAA ACAGCGATTA TGTGCTGGTC GGCCGCCGTG CGGCGTTGAG CCGCGACTTT GCTGTCATGC TCGGCGATTT GCGCTCCGCG CTCGACCGCA TTGCGCGGCG ATCGTCGAAA CCGGATTGA
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Protein sequence | MPNAGLARIG GPIRQKRRRA QLTRPGRSRI SRANCPRWPG STGAVHFLGC LRLICEPHHR AYLNLLNNLP GLRRTTREAD LSTEQIGAQA PSRLSCPSCH RWWPKGAGGA PRPRTQASER LSGPSRDQIM DRLRQRADFI AVAGGLRISG PAFVLQGRRR DDEGPVRVGF TVTKKIGTAT ERNRIRRRMR ELVKRADRSF MLPNSDYVLV GRRAALSRDF AVMLGDLRSA LDRIARRSSK PD
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