Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0048 |
Symbol | |
ID | 4020502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 60305 |
End bp | 61537 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637960224 |
Product | ABC-type branched-chain amino acid transport systems periplasmic component-like |
Protein accession | YP_567189 |
Protein GI | 91974530 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCA AGATGACCAG ACTACTTCGC AATGCGGCGC TTGCCGGCGC CGCATTGCTG GCCACGGCGG CACAGGCGCA GGACACCATC AAGGTCGGCG CCTTGCTGCC ACTGAGCGGC AATTACGGCT TCCTCGGCGT GACCGAGCGC CTTGGTATCG ACATGGCGGT CGAGGAAGTG AACAGCGCCG GCGGCATTCT GGGCAAGAAG GTCGTTGTCG TTTACGAGGA CGCCGGCACG CCTGCGCAGA CCACCCGCAA GGCGACGCAG ATGCTGGAGC AGGACAAGGT CGCCTTCTTC GTCAATGGCG GCGGCAGCGC GGTGAGCGCG ACGATGTTCG AATTCGCGCA GCGCAACAAG GTCATCGATC TGGCGATCGA TCCCAACGCC GAAGAGCTGG TGACCACCAA GGCCGGCAAA TACGCGTTTC TCGTGCCGGC GCCGAGCAGC ATGATCGCCA ACGCCGTGAT TCCGGAAGCG ATCAAGCTCG GCAAGACCGC GATGTTCCTG ACGCACGACT ATTCCTTCGG TCACGCCCAG ACCGGCGAAC AGCGCCGCGT GCTCAAGGAC AAGGGCGGCG TCAAGGAGGT CGGCGAGATC AAGATCCCGC TGAACACCCG CGACTTCAGC AGCCAGATCA TCGCGATCCG CAACGCCAAA CCGGAAATGC TGATCATCAA CGTCGCTGGC GTCGACGCGA CGGCGCTGCT CGAGCAGATC TGGGAGTTCG AACTCTACAA GCAGACCAAG ATCGTGGTGC CGCTGCTGGA TTTCGAGGAC AGCTGGGCGA TCGGTCGGGA AAAGAACCAG CTGATCGCGC TGGCTGGAAT CGAGTGGCAC TACAACGTCC CGGCCGCTGA TGCGCTGGCA TTCAAGGAGC GCTATCAGAA GCAGTTCCCG AAGGCCGAAT ACCCGGTTCC GACCACCAAC ACCGTCAACG CCTATCTCGG CGTGCGCGAG ACCCTTCGGG CGATCCAGCG AGCCGGATCG CTCGACAGCG CCAAGATCGT CGCCGCTCTG GAGAACCACG AGGTGAAGGA TTCGCTGAAG CCGAATCCGC TGGTGATCCG GGCCAAGGAC CATCAGTGGA TGCAGGACTT CTTCGTCTAC AAGATGAAGA ATCCGGCGAG CTCCAAGGAG CTGGGCGACA TCTACGAGCT GATCACCGTC GCCAAGGGGG CCGACATCGT CGTCCCCGAA GCGCAGCGCA CGACCGATCT CAACGCGCAG TAA
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Protein sequence | MTTKMTRLLR NAALAGAALL ATAAQAQDTI KVGALLPLSG NYGFLGVTER LGIDMAVEEV NSAGGILGKK VVVVYEDAGT PAQTTRKATQ MLEQDKVAFF VNGGGSAVSA TMFEFAQRNK VIDLAIDPNA EELVTTKAGK YAFLVPAPSS MIANAVIPEA IKLGKTAMFL THDYSFGHAQ TGEQRRVLKD KGGVKEVGEI KIPLNTRDFS SQIIAIRNAK PEMLIINVAG VDATALLEQI WEFELYKQTK IVVPLLDFED SWAIGREKNQ LIALAGIEWH YNVPAADALA FKERYQKQFP KAEYPVPTTN TVNAYLGVRE TLRAIQRAGS LDSAKIVAAL ENHEVKDSLK PNPLVIRAKD HQWMQDFFVY KMKNPASSKE LGDIYELITV AKGADIVVPE AQRTTDLNAQ
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