Gene RPD_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0045 
Symbol 
ID4020499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp57042 
End bp57812 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID637960221 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_567186 
Protein GI91974527 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACATC TTACGCTGAG CCGACCGGCT CCGGACCTGG CTGTGGTCCA GCTTCGCGGC 
GCCGGCCGTG TCAATCTCAT GTCCTACGCG ATGCTGGAAG AACTCTGGCG CGTCGCCAAT
GATCTGCAGT CGGATCGCGC GGTGCGCGTG GTGATCGTCA CCGGCTCGGA GCAGGCCTTC
TCCGCCGGCA TGAACCTGCG GCAGAAGGAG GTCTCCGAGT TCGAGAGCTA CAGCATCGAG
GAGCGGCTGC AGATTCACTC GATTGGCGCG CGCGCCTGCA AGGCCTGGGA AGATCTCCAT
GCGGTGACGA TCGGCGCGAT CGAGGGCTAT TGCATCGGCG GCGGCCTCGC GTTCGCCTCG
GCGCTCGACT ATCGGGTGGC GTCGTCGATG GCGACGTTGA GTGCGCCCGA ATTGCGTCAC
GGCATGAACA TGAGTTGGCA GAGCGTCCCG CGTCTGGTCG CGCTCGTCGG CCCGGCGAAA
GCGCGGCGGC TGATCATGCT CGCCGAGCAG GTCGCTGCCG CGGATGCGCT CGCTTGGGGG
CTGGTCGACG TGGTGTGCGA TCCGGGCGCC GCGCTGGCGT CCGCCGAGGC CGAGGCGCAA
CGTTTTCTCG CGATGCCGGC TGCGCCCTTG CGGATGACGA AGCAGGCGAT CAATCAGGCC
GCCGGTGCGC TCAATCATGC CGCCAGCTAC ATGGATCTCG AACAGTACGT GCTTTGTCAG
TCCACCCAGG CGCATCGCGA CAGCATCGAC GCGTTCACAG GGCGCAGTTG A
 
Protein sequence
MEHLTLSRPA PDLAVVQLRG AGRVNLMSYA MLEELWRVAN DLQSDRAVRV VIVTGSEQAF 
SAGMNLRQKE VSEFESYSIE ERLQIHSIGA RACKAWEDLH AVTIGAIEGY CIGGGLAFAS
ALDYRVASSM ATLSAPELRH GMNMSWQSVP RLVALVGPAK ARRLIMLAEQ VAAADALAWG
LVDVVCDPGA ALASAEAEAQ RFLAMPAAPL RMTKQAINQA AGALNHAASY MDLEQYVLCQ
STQAHRDSID AFTGRS