Gene RPD_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0030 
Symbol 
ID4020484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp37697 
End bp38431 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID637960206 
Producthypothetical protein 
Protein accessionYP_567171 
Protein GI91974512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.878438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCG TGGCGGCTGA AGACGCTCCC TTGGTACACT GGTCGGGGAG CGCTTATCGG 
CTGATCCCAT CCAGGTTTCC CCCGGTCAGC ATCTATGACG GGCTGATCGC CAGCGACCGG
CAGGAAGAGC TCGTCGCGGT GGAGAACCTC ACCAACCCGC GCCTGCGTTC CCTCGGTCGC
TTTCAGGAGG CGGGGAGCCC TGGACCTTGC GCTGATCCTA AGCTCCAGAA CTGGAATTTG
GCGCCGTTCG CCTACGGCAA TCCGGACGGT AGTACGTTCT TCGGGGAAGA ACGACCGTGT
CTCGAACTCG CCATGGAGCA ACAGACGGCG CTTGCCGTGT CGGTAGCCAA GCGGCAGGCG
TTCATGGAAG CCACGAACGA GGCGCCCATC GGCCTCGATA TGAGGATGCT CTGTCATCCG
GTGGACGGCA TCTTCTGGGA TCTGCGCGAC GTCCCCATTT CCTGGTCAGA GCTTGGCCAG
GCCAAGCGCT ACGAACTCGG CGCCAAGATG CCGATAGGCG CTCAGGGTAT TCTGTTCCGG
CCGGTCGAGC GGCCAACCGG CACGTGCCTG GTTGTCCTGA CCGGCGACAT CTTGCAGCGA
TCCCAGCAGA CGGTCCATTT CCGCTTCGTC TGGGATGGCA AAAAGATCTC TCAGCTCTAC
GTCTTCAACA ATGAAGGGAC GCGGATCGAC GCCGACAAGC TCGCCGGCCG AGAGGATGTG
TTGGCGGCAA CCTAG
 
Protein sequence
MPSVAAEDAP LVHWSGSAYR LIPSRFPPVS IYDGLIASDR QEELVAVENL TNPRLRSLGR 
FQEAGSPGPC ADPKLQNWNL APFAYGNPDG STFFGEERPC LELAMEQQTA LAVSVAKRQA
FMEATNEAPI GLDMRMLCHP VDGIFWDLRD VPISWSELGQ AKRYELGAKM PIGAQGILFR
PVERPTGTCL VVLTGDILQR SQQTVHFRFV WDGKKISQLY VFNNEGTRID ADKLAGREDV
LAAT