| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0020 |
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| Symbol | |
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| ID | 4020474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 25241 |
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| End bp | 27334 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960196 |
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| Product | AAA ATPase, central region |
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| Protein accession | YP_567161 |
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| Protein GI | 91974502 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.25118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGA CGAATGCGAA GGCGAACGTC AAACGAGCCC GAGCGAACGT TCGGCGCCGG
GCGGCAGTCG CGAAGAAGCC GCCTCGCAAG ATCGCGAGCA AGGCCGGCCG CAAGCCTGCG
CGCAAAGGTG TTGGCCGAAA GGTCGCTGCT GCGCGACCAC GGGGACCTTG GACGACGTTG
GTCCAGCCCA TCGAGCAGCC GGAAGGCACC AATGAAGTAG CTGAGTCCGC GTCATCCGAT
CCGCCGCTGC CCCGGGAGCG GCCGACGGCG CGTTGCGCAC TCGTTGCGGC CGCTTGGACG
TTGGCGACGA CAGGAGAAAT CCGTGCTCGA CTGAAAGAAG GCGGTTCGCT TGCCGTGGTC
GTCGTCGTCC CCACGTCGGC CTGGGTCGCG TCGGTCAAAT CAATGTTCGA AAAACGTTTC
GGGCGAGGCT GGGAAATCTT CTCCATCGAC GACACGACAG CGAAATCTCC TCGCGAACAG
GCAGCGCAGA ATATCTGCGC CGCAAACGAA CTCATGAAGG GGCATGCGGT CGTCGGCATC
GCAGCCCAGC GCGATGCGCT GCCGCCGGCG TTGACGACCG CAGCCGACAT CACGATCCGG
ATCGAACCTC TCCGGGGCTC GGTGATCCGC CGCGCTATCC GACTGTTCAC CGGGCTGCCG
GTCGGGCAGG TGGAGGACGA CATCGCCGCC GGCGGCGATT TCCTGGACCT GCTGGCGGCC
TTCCGATCCG GCAGTACGCC GACGGACATC CTGCTAAGGC TGCGCCGGGC AACAGCACGG
AGCGTCGACG AAGGGCAGCG GCTTCCGGCG CTGGAGTCTG CCGTGGAATA CGGGGCAGCC
CGGGAATGGG GCTTGGCGCT TGCTCGCGAC ATCGCCGACT ATCGCGCCGG CCGTCTCGAC
TGGCGCGAGG TCGACCGCGG GGCCGTGCTG CACTCGGAGC CTGGACTCGG TAAGACGTTG
TTCGCCCAAA TCTTGGCGCG CGCCTGCGGG CTGCCGCTGA TCGCGACCTC GGTTGCCGAC
CTGTTCGCCT CTTCGCCCGG CTATCTGGAT TCGGTGATCA AGGCGTCGCG CGCGGTATTC
GACCGCGCCG CCGCCTCGGC GCCGTGCATC CTGTTTCTCG ACGAGATCGA TGCTCTGCCG
AACCGCGCCA CGATGTCCCC GCGCGGAGCG GATTGGTGGA CGCCGGTGAT CACCGACTTC
CTGCTGAGGC TCGACAACGC GGTCGCCAAC CAACGCGCCG GCATCGTGGT GATCGGTGCG
ACCAACAACA TCGCAGGCGT GGACGGGGCG ATGCTGAGAC CAGGCCGCCT CGAGCGATCG
ATAGAAATTC TGCGCCCGGA CCATGCCGGC GTAATCAACA TCCTGCGCCA CCACCTCGAG
CGCGATCTCG CGACCGCCGA GCTTACCGAC GTTGGCCATC TGTTGCACGG TGGCACCGGC
GCCGAGATCA TGATGGTCGT GCGACAGGCC CGGCGCCTCG CTCGGCACGA CCGCCGTACC
TTGGAGGTCG CCGACCTGCT ACGAGCGGTC GTACCGATCG AGGAGATCGC GCCCGATCTG
CTGTTCCGCA TCTCAGCCCA CGAAGCGGCC CATGCCGTAG GTACGCTGGT CTTAGGATGC
GGGTCTCTGC TTCGCAGCAC CGTGACGCCG AGAGGTGGTC GAACGACTGT GGCGCAGGAC
CTTGGCGTTG CCTCGACCCG AGCGACCGTG GAGAGCGAGG CGGTCATGCT GCTCTGCGGT
CGCGCGGCTG AGCGGCTGAT CCTGGGTGAC GTTTCGCTCG GATCCGGTGG CACTGGAGCG
TCCGATCTCG CCCTCGCCAC CAAGATGGTC GCGGCCCTCC ACGCATCGTC GGGCCTCGGT
GAGACCCTCA CCTACCTTTC GTCCCATGAG GATGCGCTGG AGACCCTCCG TTTCGACGTG
GGGCTACGTA TGCGGGTCGA GCGCGAGATG ATCGCGGTGC AGGAACGGGC CGACGAGCTG
GTCCGTCGCC ACCGCGCTGC AATTCTCGCG GTGGCCGAGC AGCTGCGGGC GCGCCGCCAA
CTCACCGGCA CCGAGATCAG GCAGATCCTA GATGAGATGC CTCCGAAATC ATGA
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| Protein sequence | MTRTNAKANV KRARANVRRR AAVAKKPPRK IASKAGRKPA RKGVGRKVAA ARPRGPWTTL
VQPIEQPEGT NEVAESASSD PPLPRERPTA RCALVAAAWT LATTGEIRAR LKEGGSLAVV
VVVPTSAWVA SVKSMFEKRF GRGWEIFSID DTTAKSPREQ AAQNICAANE LMKGHAVVGI
AAQRDALPPA LTTAADITIR IEPLRGSVIR RAIRLFTGLP VGQVEDDIAA GGDFLDLLAA
FRSGSTPTDI LLRLRRATAR SVDEGQRLPA LESAVEYGAA REWGLALARD IADYRAGRLD
WREVDRGAVL HSEPGLGKTL FAQILARACG LPLIATSVAD LFASSPGYLD SVIKASRAVF
DRAAASAPCI LFLDEIDALP NRATMSPRGA DWWTPVITDF LLRLDNAVAN QRAGIVVIGA
TNNIAGVDGA MLRPGRLERS IEILRPDHAG VINILRHHLE RDLATAELTD VGHLLHGGTG
AEIMMVVRQA RRLARHDRRT LEVADLLRAV VPIEEIAPDL LFRISAHEAA HAVGTLVLGC
GSLLRSTVTP RGGRTTVAQD LGVASTRATV ESEAVMLLCG RAAERLILGD VSLGSGGTGA
SDLALATKMV AALHASSGLG ETLTYLSSHE DALETLRFDV GLRMRVEREM IAVQERADEL
VRRHRAAILA VAEQLRARRQ LTGTEIRQIL DEMPPKS
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