| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0013 |
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| Symbol | |
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| ID | 4020467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 15807 |
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| End bp | 18746 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637960189 |
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| Product | DNA methylase containing a Zn-ribbon |
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| Protein accession | YP_567154 |
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| Protein GI | 91974495 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.607191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCCA AGGTCATGAA GTCGAAGGTT GTCCCATTCT CGCTGAAGGA CGCGCCATCG
TTGATCGAAC GCGTGTGGCC GGCGCAAATG ATCTCTGTTG AGGCTCAACG CGAGCGCAAG
GCTGTTCATG GTCAAACCCT GACCAGCCTC GGATCATACT GGAAAGGGCG CAAACCGTTG
GTGCTCGTCA GGGCGTGCAT CCTTGGAGCT TTGTTGCCAT CCACTGGAGA CGACGAGAAG
GATCTGGCGA TCTTTGAAAA GCTTATGGGA ATGAGCGACG ACCAAGTCGC TTGTCGATTC
AAGGAAAAGG TGTCGGTCGA AGAAGTCCAA AAATTCGGAA CTGTTTCTCA ACAAAGTGCG
CTGATCGACG ACGATGGCCA AGGGACAACG CTTAGGAAGC TCCCGAAAGC ACAGCGCGAA
TCATTGATGG GATCGGTGAT CCAGCGCATG CCGTATGATG TGCGCGCCCA GAAGCTTCTG
CGTCCCGAAG AGGTCGATGA AAGTGTCTTA ACCGGGCCGG CGCTCGATGA AGTCAACAAG
CATCTTGGAA CTGACGCGAG CAATCTGTCT GAACTGCTCG AACAGTTGGG GCTCATGCGG
TTCGGTAGAC GCCCGGTCGT GGTCGACACT TTTTCGGGTA GCGGATCAAT ACCATTCGAG
GCTGCCAGGC TGGGGTGCGA TGTCTTTGCC TCAGATCTCA ATCCAATTGC CTGCATGTTG
ACGTGGGCAG CACTAAACGT AGTCGGTGGC TCGGACGCGT CGAGGAAAGA AATCCAGCAG
GAGCAAGCGG CTCTAGCAAA GGCTGTCGAT GAGGAGATCA CCCGGCTCGG GATAGAACAC
GATAGCCACG GCAATCGCGC CAAGGTCTTT TTGTACTGCC TTGAGGCGCG CTGTCCTCAA
ACCCAATGGT TGGTCCCGCT TGCGCCTACT TTTGTTGTTT CCGAAGCAAG AAGAGTGGTC
GCTCGTCTTG TTCCGAACAA ATCCAAGAAA CAGTTCGATC TGGAAATTGT TTCTGGTGCA
AATGCCAAGG AGATGGCCGA GGCAGCCGCT GGAACGGTGC GCGACGGAAA GATGGTTTAC
TCGCTGGACG GCGAAACTTA CTCCACACCA ATAAAGACGA TTCGGGGCGA TCGCCGCGAA
GCCGGGGGGA TCGCGGCGAA CAATCTGCGA CTCTGGGAAA AGTCAGATGT TGCTCCGAGG
TCGGGCGATA TTCTTAGCGA GCGTCTCTAC TGCATCCAGT GGATCGAGCA GGAGACCGTG
GGAAAAAGTC GGCAGGTCAC GTTTTTTGCC TCGCCTACTG CCGCCGACCT TAAGCGAGAA
TTGAAGGTAA AGAACCTCGT CAGTCACAAA CTTAAGGAGT GGCAGGAGGG TGGGTTCGTC
TCGGACATGG AGATCGAAAC GGGCAAGGAA AATGAAGGGC CGATCCGCAC TAACGGCTGG
AAGTTTTGGC ACCAGATGTT CATGCCAAGG GCGATACTGA CCGCGGCGCT CATCGCTGAG
CACGGCCAAG GTCGTGCCCA TGCCGCACTG TCTCTTTGCA AGTACCTAGA TAACAATTCA
AAATCGTGCC GTTGGAAAGT GTCGCAGTCA GGAGGAGACG GCGGCGCCGT GTCTACGTTC
GATAGCCAAG CCTTGAAGAC AATCTTCAAT TGGGCTTTCC GGGCATTGAA CGTTGCGCCT
TGGCAGCTCG GAGAATTTGC GAGATCACCG ATAAGAACCA ATGCAACGAT AGAGTGCGTT
GATGCCCGCA ATTTCCGGCA CAGTATGGAT CTATCGATCA CAGACCCGCC ATACGCCGAT
GCCGTGAATT ACCATGAGAT CACAGAATTC TTCATCGCAT GGATCAGGAA AAATACGCCG
ACTGAATTCG AGGAGTGGAC CTGGGATTCA AGGAGGCCTC TTGCGATTAA GGGAGACGGG
GAAGATTTCC GCCACGGAAT GGTGGACGCC TATAAGGCGA TGTCGGAAAA AATGGCGCCT
AATGGCTTAG AAATTGTCAT GTTCACCCAT CAGTCGGCTT CTGTCTGGGC GGACATGGCT
CAAATCTTCT GGGGCGCCGG CCTTCAGGTC ATGGCCGCTT GGTACATCGC CACCGAGACC
ACTTCCGATC TGAAGAAAGG CGGGTACGTG CAGGGCACGG TCATCCTGGT TGCGCGGAAA
CGTCGGGAGA GAGAGGCTGG CTACAAAGAT GAGATCGTCC AAGAGGTGAA GGCCGAGGTT
GCAGACCAGA TCGATACTAT GTCCGGGTTG AGCCAGAACC TAAAAGGTCG CGGCCGTATC
GAAAACCTCT TCGAGGATGC GGATCTTCAA ATGGCAGGTT ATGCGGCAGC ACTACGTGTG
CTCACCAAGT ATGAGAGAAT TGACGGCACC GACATGACGA AGGAAGCCCT GCGCCCCCGT
CGAGCGGGAG AAAAGAACAT CGTCGGAGAG ATCATCGACT TTGCCGTACA GGTGGCCAAT
GAGCATATGG TGCCTGAGCA CATGCCTCCC AAGCTTTGGG GGGATTTATC CGGTGCCGAG
CGTTTCTACT TCAAAATGCT GGATATCGAG ACAACCTCAC TCCGGAAGCT GGACAACTAC
CAGAATTTCG CGAAGGCTTT CCGAGTAAAC GACTACAGTG CGCTTATGGG CAGCATGGAG
CCGAACAAAG CGCGGCTGAA ATCCGCTAAG GAATTCAAGA AGGCAGGCTT CGAAATTCCG
GACTTCGGTC CATCGTCAAC TCGTTCTGCG CTGTTTGCAA TCTTCGAATT GGAGAGCGAT
GTCGAGGGGG ATGACGTACT ATCTCATCTG AAAGATCTGA TGCCCAATTA CCACAATAAG
CGGGAGGACT TGGCGGCGAT CGCGGATTAC ATTGCCCGAA AGCGGGAGAC CGTGGACGAG
ACAGAATCGC GGGCAGCGCG TATCCTCCAC GGACTGATCC GGAACGAGCG GCTGGGATGA
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| Protein sequence | MDAKVMKSKV VPFSLKDAPS LIERVWPAQM ISVEAQRERK AVHGQTLTSL GSYWKGRKPL
VLVRACILGA LLPSTGDDEK DLAIFEKLMG MSDDQVACRF KEKVSVEEVQ KFGTVSQQSA
LIDDDGQGTT LRKLPKAQRE SLMGSVIQRM PYDVRAQKLL RPEEVDESVL TGPALDEVNK
HLGTDASNLS ELLEQLGLMR FGRRPVVVDT FSGSGSIPFE AARLGCDVFA SDLNPIACML
TWAALNVVGG SDASRKEIQQ EQAALAKAVD EEITRLGIEH DSHGNRAKVF LYCLEARCPQ
TQWLVPLAPT FVVSEARRVV ARLVPNKSKK QFDLEIVSGA NAKEMAEAAA GTVRDGKMVY
SLDGETYSTP IKTIRGDRRE AGGIAANNLR LWEKSDVAPR SGDILSERLY CIQWIEQETV
GKSRQVTFFA SPTAADLKRE LKVKNLVSHK LKEWQEGGFV SDMEIETGKE NEGPIRTNGW
KFWHQMFMPR AILTAALIAE HGQGRAHAAL SLCKYLDNNS KSCRWKVSQS GGDGGAVSTF
DSQALKTIFN WAFRALNVAP WQLGEFARSP IRTNATIECV DARNFRHSMD LSITDPPYAD
AVNYHEITEF FIAWIRKNTP TEFEEWTWDS RRPLAIKGDG EDFRHGMVDA YKAMSEKMAP
NGLEIVMFTH QSASVWADMA QIFWGAGLQV MAAWYIATET TSDLKKGGYV QGTVILVARK
RREREAGYKD EIVQEVKAEV ADQIDTMSGL SQNLKGRGRI ENLFEDADLQ MAGYAAALRV
LTKYERIDGT DMTKEALRPR RAGEKNIVGE IIDFAVQVAN EHMVPEHMPP KLWGDLSGAE
RFYFKMLDIE TTSLRKLDNY QNFAKAFRVN DYSALMGSME PNKARLKSAK EFKKAGFEIP
DFGPSSTRSA LFAIFELESD VEGDDVLSHL KDLMPNYHNK REDLAAIADY IARKRETVDE
TESRAARILH GLIRNERLG
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