Gene RPD_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0010 
Symbol 
ID4020464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp11481 
End bp12173 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID637960186 
Producthypothetical protein 
Protein accessionYP_567151 
Protein GI91974492 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAATC TGTACTCGAT CACCAAGAAC CAGGACGCGA TCCGGCAGAT CTTCCGGATT 
GCCCGCGACA CCACCGGCAA CCTGCCCCCG CTCCCGGCGA TCTTCCCGGA CGGGCTGGCG
CCGATCGTCC GCGCCGCCGG CGAGCGCGAG CTGACGATGA TGCGCTGGGG CATGCCCGGA
CCGCCGCAGT TCGGCGGGAT CCCAGTGACC AACATCCGGA ACACAAAATC CCCGCACTGG
CGCCGATGGC TGAAGCCGGA GAACCGGTGC CTGGTGCCGG CGACGAGTTT TTCCGAATAC
AATGCGACGG CTAATCCGAA ATCCCTCACT TACCCCGACG GCTCGCCCCA TCCGATGGCC
GGCAAGAAGG ACGTGGTCTG GTTCGCGCTG TCTCCGGAGC GGCCACTGTT CGCGTTCGCG
GGCATCTGGA CCGAATGGAC CGGCACCCGG GGGACGAAGG CCAACCCGGT CGAGGGTGCC
CATCTGCTAT ACGGCTTTCT CACCACCGAA CCGAACGCCA TCGTCGCTCC GATCCACCCG
AAGGCGATGC CCGTCATCCT GACGACGGAA GAAGAGCGCG ACGTCTGGAT GCGGGCGCCA
TGGGGCGAGG CGGCGGCGCT GCAGCGGCCG TTGCCGGACG GTCCACTACA GATCGTGGCG
CGCGGTGCGA ACAAAGAGGA CCGTTCGACC TAA
 
Protein sequence
MCNLYSITKN QDAIRQIFRI ARDTTGNLPP LPAIFPDGLA PIVRAAGERE LTMMRWGMPG 
PPQFGGIPVT NIRNTKSPHW RRWLKPENRC LVPATSFSEY NATANPKSLT YPDGSPHPMA
GKKDVVWFAL SPERPLFAFA GIWTEWTGTR GTKANPVEGA HLLYGFLTTE PNAIVAPIHP
KAMPVILTTE EERDVWMRAP WGEAAALQRP LPDGPLQIVA RGANKEDRST