Gene RPD_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0007 
Symbol 
ID4020461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp8751 
End bp9092 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content59% 
IMG OID637960183 
Producthypothetical protein 
Protein accessionYP_567148 
Protein GI91974489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGA CCGTAGCGGC GCTCATCGTT CTCCTGCTCA ACGCGGAAGT GCGTTCAGAG 
ACTGTCGACG TCAAATATCG CGGGCCGGTC GACCTCAGGA CCTTCGAGTG CCGGGACATC
ACTCGCAGCA GTTTCATCCA GCGGGTCTGT TACGATCAGG CGCAGGCCTA CATGATCATC
AGCCTCAAAG GCACATACTA TCACTACTGC GAGTTATCGC GGGCGACGTT CGACAGCCTG
ATGGGTGCGC CGTCGATGGG GCAATTCTTC AATCAGACCA TCAAGGGGAC CGGCAGCGAC
GGCCCGTTTG ACTGCCGGAC ACACCGGACG CCCAGCTATT GA
 
Protein sequence
MIRTVAALIV LLLNAEVRSE TVDVKYRGPV DLRTFECRDI TRSSFIQRVC YDQAQAYMII 
SLKGTYYHYC ELSRATFDSL MGAPSMGQFF NQTIKGTGSD GPFDCRTHRT PSY