| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0003 |
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| Symbol | recF |
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| ID | 4020457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3622 |
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| End bp | 4758 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637960179 |
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| Product | recombination protein F |
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| Protein accession | YP_567144 |
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| Protein GI | 91974485 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.552608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAT CCCGCATCAC CCGGCTGACG CTGACGCACT TCCGCAATTA TCGGGCGGCG
GCGTTGCATA CGCGTGGCGA ACGGGTGGTG CTGGTGGGCG CGAACGGCGC GGGCAAGACC
AATTGTCTCG AGGCGATCTC GTTTCTGTCG CCCGGCCGCG GCCTGCGCCG CGCCACGCTC
GACGACGTCT CCGACCATCA GGGCGACGGC TCCTGGGCGG TGTCGGCCGA GGTCGAGGGC
GCGCTCGGCC TCGCCACGCT CGGCACCGGG ATCGACCCAC CGCGCGCCGA CGCCGCCACG
ACGCGGCGCT GCCGGATCGA CCGCGAGCCG GTCGGCTCCG CCACCGCCTT CGGCGATCAT
CTGCGCATGG TGTGGCTGAC GCCTGCGATG GACGGACTGT TCATGGGCGC GGCGTCGGAA
CGGCGGCGGT TTTTCGATCG CCTGGTGCTG GCGATCGACA GCCAGCATTC CAGCCGGGTC
TCGGCGCTCG ACCGCAGCCT GCGCTCGCGC AACCGGCTGC TGGAGGAACG CAACGCGGAC
CGCCACTGGC TCGACGCGAT CGAGCGCGAA ACCGCCGAAC TCGCCGTCGC GGTCGCGGCG
ATGCGCGGCC AGACCGCGGC GCGGCTCGCC GCGATGCTCG ACGCCCGCGG CGCGGCGTCG
GCGTTTCCGT CGGCGAAGAT CATGCTCGAC GGCTGGATGG AAAGCGCGCT GCTGACCGAG
CCGGCGACCG CGGTCGAGGA TCGCTACCGC GCGATCCTGC GCGATGGCCG CCTGCGCGAC
GCCGCCGCTG GCCGTACCCT CGACGGCCCG CATCTCACCG ATCTCCAGGT GATCTACGCG
CCGAAGGCGA TGCCGGCGCG CGACGCCTCC ACCGGCGAGC AGAAGGCGCT GCTGATCGGG
CTGGTGCTCG CCCATGCGCA GCTCGTCTCC GAGATCACCG GCATCACGCC GCTGCTGCTG
CTCGACGAGG TGGTGGCGCA TCTCGACCCC GCCCGCCGCC GCGCGTTGTT TGCGGAACTC
GAGCGGCTTG GCGCGCAGGT CTGGATGACC GGCGCCGATC CGGCGGGCTT CGCCGAGATC
GGCCCCGACG CCGAGATTTT CACCGTCGAG TCGGGCCGGA TCGCGCCGCA AAAATGA
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| Protein sequence | MTASRITRLT LTHFRNYRAA ALHTRGERVV LVGANGAGKT NCLEAISFLS PGRGLRRATL
DDVSDHQGDG SWAVSAEVEG ALGLATLGTG IDPPRADAAT TRRCRIDREP VGSATAFGDH
LRMVWLTPAM DGLFMGAASE RRRFFDRLVL AIDSQHSSRV SALDRSLRSR NRLLEERNAD
RHWLDAIERE TAELAVAVAA MRGQTAARLA AMLDARGAAS AFPSAKIMLD GWMESALLTE
PATAVEDRYR AILRDGRLRD AAAGRTLDGP HLTDLQVIYA PKAMPARDAS TGEQKALLIG
LVLAHAQLVS EITGITPLLL LDEVVAHLDP ARRRALFAEL ERLGAQVWMT GADPAGFAEI
GPDAEIFTVE SGRIAPQK
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