Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0003 |
Symbol | recF |
ID | 4020457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3622 |
End bp | 4758 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637960179 |
Product | recombination protein F |
Protein accession | YP_567144 |
Protein GI | 91974485 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.552608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAT CCCGCATCAC CCGGCTGACG CTGACGCACT TCCGCAATTA TCGGGCGGCG GCGTTGCATA CGCGTGGCGA ACGGGTGGTG CTGGTGGGCG CGAACGGCGC GGGCAAGACC AATTGTCTCG AGGCGATCTC GTTTCTGTCG CCCGGCCGCG GCCTGCGCCG CGCCACGCTC GACGACGTCT CCGACCATCA GGGCGACGGC TCCTGGGCGG TGTCGGCCGA GGTCGAGGGC GCGCTCGGCC TCGCCACGCT CGGCACCGGG ATCGACCCAC CGCGCGCCGA CGCCGCCACG ACGCGGCGCT GCCGGATCGA CCGCGAGCCG GTCGGCTCCG CCACCGCCTT CGGCGATCAT CTGCGCATGG TGTGGCTGAC GCCTGCGATG GACGGACTGT TCATGGGCGC GGCGTCGGAA CGGCGGCGGT TTTTCGATCG CCTGGTGCTG GCGATCGACA GCCAGCATTC CAGCCGGGTC TCGGCGCTCG ACCGCAGCCT GCGCTCGCGC AACCGGCTGC TGGAGGAACG CAACGCGGAC CGCCACTGGC TCGACGCGAT CGAGCGCGAA ACCGCCGAAC TCGCCGTCGC GGTCGCGGCG ATGCGCGGCC AGACCGCGGC GCGGCTCGCC GCGATGCTCG ACGCCCGCGG CGCGGCGTCG GCGTTTCCGT CGGCGAAGAT CATGCTCGAC GGCTGGATGG AAAGCGCGCT GCTGACCGAG CCGGCGACCG CGGTCGAGGA TCGCTACCGC GCGATCCTGC GCGATGGCCG CCTGCGCGAC GCCGCCGCTG GCCGTACCCT CGACGGCCCG CATCTCACCG ATCTCCAGGT GATCTACGCG CCGAAGGCGA TGCCGGCGCG CGACGCCTCC ACCGGCGAGC AGAAGGCGCT GCTGATCGGG CTGGTGCTCG CCCATGCGCA GCTCGTCTCC GAGATCACCG GCATCACGCC GCTGCTGCTG CTCGACGAGG TGGTGGCGCA TCTCGACCCC GCCCGCCGCC GCGCGTTGTT TGCGGAACTC GAGCGGCTTG GCGCGCAGGT CTGGATGACC GGCGCCGATC CGGCGGGCTT CGCCGAGATC GGCCCCGACG CCGAGATTTT CACCGTCGAG TCGGGCCGGA TCGCGCCGCA AAAATGA
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Protein sequence | MTASRITRLT LTHFRNYRAA ALHTRGERVV LVGANGAGKT NCLEAISFLS PGRGLRRATL DDVSDHQGDG SWAVSAEVEG ALGLATLGTG IDPPRADAAT TRRCRIDREP VGSATAFGDH LRMVWLTPAM DGLFMGAASE RRRFFDRLVL AIDSQHSSRV SALDRSLRSR NRLLEERNAD RHWLDAIERE TAELAVAVAA MRGQTAARLA AMLDARGAAS AFPSAKIMLD GWMESALLTE PATAVEDRYR AILRDGRLRD AAAGRTLDGP HLTDLQVIYA PKAMPARDAS TGEQKALLIG LVLAHAQLVS EITGITPLLL LDEVVAHLDP ARRRALFAEL ERLGAQVWMT GADPAGFAEI GPDAEIFTVE SGRIAPQK
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