| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0002 |
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| Symbol | |
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| ID | 4020456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2329 |
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| End bp | 3447 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637960178 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_567143 |
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| Protein GI | 91974484 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.120269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCA CGGTCGAACG CGCGCAACTT CTGAAGTCGC TGGGCCACGT CCACCGCGTG
GTCGAGCGCC GTAACACCAT TCCGATTCTC GGCAACGTGC TGGTGCGCGC CGAAAACGCC
CAGCTTGCAT TGAAGGCGAC CGACCTCGAC CTCGAAGTGA TCGAGACGCT GCCGGCTGAG
ACCGCCACCG CGGGCTCGAC CACCGTGCCG GCACATATGT TCTACGACAT CGTGCGCAAA
TTGCCCGACG GCTCGCAGAT CGTGCTGGAG AGCGACGGCG ATCGTTCGGT GCTGGCGATC
CGCGCCGGGC GCTCGCGCTT CACGCTGCAG ACCCTGCCGG AGAGCGACTT TCCCGATCTC
GCCGCCGGCG AGATGTCGCA TTCCTTCTCG CTCGCCGCTT CCGACGTGAA GCGGCTGATC
GACCGCACCC AGTTCGCGAT CTCCACCGAG GAGACGCGCT ATTATCTCAA CGGCATCTAT
CTGCACACTG CGGGCTCGGC AAAAGCCGCG ACGCTGCGCG CGGTCGCGAC CGACGGCCAT
CGCCTGGCGC AGGTCGATCT GGCGCAACCC GCCGGCGCCA GCGGGATGCC CGGCGTGATC
GTGCCGCGCA AGACGGTCGG CGAAGTCCAG CGGCTGATCG AGGACAACGA CGCCGAGATC
GCCATCGAAC TATCCGCCGG CAAGATCCGC TTCACCATCG GCAATGTGGT GCTGACCTCG
AAGCTGATCG ACGGCACCTT CCCGGATTAC GGCCGCGTCA TTCCGCAGAA CAACGACAAG
GAACTGGTGG TCGACAAGAA GGAATTCGAA GCCGCGGTCG ATCGCGTCTC GACGATTTCC
TCCGAGCGCG GCCGCGCGGT GAAGCTGGCC TTGAGCGCCG GCAAGCTCGT GCTGTCGGTG
ACCAATCCGG ATTCCGGCAG CGCCACCGAA GAGCTCGAGG TCGAATACGC CTCCGACGCG
CTCGATATCG GTTTCAACTC CCGCTATTTG CTCGACATCG CAGCCCAGAT CGAGGGCGAA
GTCGCGGTGT TGAAGCTCGC CGACCCCGGC TCGCCGACCC TGATCCAGGA CCGCGACACC
AAGAACGCAC TGTATGTGCT GATGCCGATG CGGGTGTAG
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| Protein sequence | MKVTVERAQL LKSLGHVHRV VERRNTIPIL GNVLVRAENA QLALKATDLD LEVIETLPAE
TATAGSTTVP AHMFYDIVRK LPDGSQIVLE SDGDRSVLAI RAGRSRFTLQ TLPESDFPDL
AAGEMSHSFS LAASDVKRLI DRTQFAISTE ETRYYLNGIY LHTAGSAKAA TLRAVATDGH
RLAQVDLAQP AGASGMPGVI VPRKTVGEVQ RLIEDNDAEI AIELSAGKIR FTIGNVVLTS
KLIDGTFPDY GRVIPQNNDK ELVVDKKEFE AAVDRVSTIS SERGRAVKLA LSAGKLVLSV
TNPDSGSATE ELEVEYASDA LDIGFNSRYL LDIAAQIEGE VAVLKLADPG SPTLIQDRDT
KNALYVLMPM RV
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