| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0001 |
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| Symbol | dnaA |
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| ID | 4020455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 649 |
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| End bp | 2067 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960177 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_567142 |
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| Protein GI | 91974483 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.206184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATA TGGAACATGA TCGCTGGTCT CGCGTAAAAG GCCGTTTGCG CTCGAGCGTC
GGCGAGGACG TCTATTCGAG CTGGTTCGCG CGGATGGACC TCGAAGCCGT TCAGCAGGAA
AGCGTGCATT TGTCGGTGCC GACGCGGTTT CTGAAGAGCT GGATCCAAAC GCACTACTCC
GAGAAGGTGC TGACCTGCTG GCAGGCGGAA ATGCCGGAGG TTTGCCGCAT CGATCTCACC
GTACGCTCGC CGATGCGCGC CGCGGTGACG AAGGAAGCGC CCGCGCCGGC CGAGCATCGC
CGCGACGAGC ACCGTCCGGC GGCGGACGCG CGCAGCCACG CAGCCGCCCC GGCCCCTTCC
AATCATGACG CACTCGGCGG CTCGCCGCTC GATCCGCGGC TGACATTTGC GAGCTTCGTC
GTCGGACGCT CCAACACGCT GGCGCACGCC GCCGCAAAGC AGGTGGCGGA AGGCCGCCGC
GGCGATCCGG TGATGTTCAA CCCGCTGTAC ATCCATTCCG GCGTCGGCCT CGGCAAGACG
CATCTGCTGC AGGCGGTGAC CTGGGCCGGC AATTCCGGCA CCGAGCGCAA GGTGCTGTAT
CTCACCGCCG AGAAATTCAT GTACGGCTTC GTCGCTTCAC TGAAGACGCA GACCTCGCTC
GCCTTCAAGG AAGCTCTGCG CGGCATCGAC GTGCTGGTGA TCGACGATCT GCAGTTCCTG
CAGGGCAAGA CCACCCAGGC CGAATTCTGT CACACCCTGA ACGCGCTGAT CGACGCCGGC
CGGCAGGTCG TGGTGGCGGC CGATCGTCCG CCGGCGGATC TCGAAAGCCT CGACGAACGC
GTCCGCTCGC GGCTCGCCGG CGGCCTCGTG GTCGAAATGG CGCCGCTCGG CGAAGAGCTG
CGGCTCGGCA TTCTGAAGTC GCGCGTGGTC GCGGCCCGCA CCCATCATGC GAGCTTCGAC
GTGCCGCAAT CGGTGCTGGA ATATCTCGCC CGCGCCATCA CCCATAACGG CCGCGACCTC
GAAGGCGCGA TCAACCGGCT GCTGGCGCAT TCCAAACTGA ATGCTCAGCC GGTGACGCTG
GAGATGGCCG AGCACGAGGT GCGCGACCTG ATCCGGCCGC AGGAACCGAA GCGGATCAAG
ATCGAGGACA TTCAGCGCGT CGTCGCGCGG CAGTACAATG TCAGCCGCTC CGACCTGTTG
TCGTCGCGCC GTACCGCCAA TGTGGTGCGG CCGCGCCAGG TGGCGATGTA TCTTGCCAAG
ACGCTGACGC TGCGCTCGCT GCCGGAAATC GGCCGCCGCT TCGGCGGACG CGATCACACC
ACGGTGCTGC ACGCCGTGCG CAAGATCGAA GGGCTGGTGT CGAAGGACGT CACGCTGTCC
GACGAGGTGG AATCGCTCAA GCGCCAGCTT CAGGAATAG
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| Protein sequence | MSNMEHDRWS RVKGRLRSSV GEDVYSSWFA RMDLEAVQQE SVHLSVPTRF LKSWIQTHYS
EKVLTCWQAE MPEVCRIDLT VRSPMRAAVT KEAPAPAEHR RDEHRPAADA RSHAAAPAPS
NHDALGGSPL DPRLTFASFV VGRSNTLAHA AAKQVAEGRR GDPVMFNPLY IHSGVGLGKT
HLLQAVTWAG NSGTERKVLY LTAEKFMYGF VASLKTQTSL AFKEALRGID VLVIDDLQFL
QGKTTQAEFC HTLNALIDAG RQVVVAADRP PADLESLDER VRSRLAGGLV VEMAPLGEEL
RLGILKSRVV AARTHHASFD VPQSVLEYLA RAITHNGRDL EGAINRLLAH SKLNAQPVTL
EMAEHEVRDL IRPQEPKRIK IEDIQRVVAR QYNVSRSDLL SSRRTANVVR PRQVAMYLAK
TLTLRSLPEI GRRFGGRDHT TVLHAVRKIE GLVSKDVTLS DEVESLKRQL QE
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