| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_2399 |
|---|
| Symbol | |
|---|
| ID | 3998987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 2522569 |
|---|
| End bp | 2523537 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637960127 |
|---|
| Product | farnesyltranstransferase |
|---|
| Protein accession | YP_567000 |
|---|
| Protein GI | 91774308 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0453989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTTA TGGATGAGAT AAAAAAAAGA AGTGTATATG TTGATAAAGG TATAGGCGAA
TTTCTTCCGA TCTCACATCC GGAAGAGCTC TATAGAGCTT CGAGATATTT GCCGGATGCT
GGTGGAAAGC GTCTTCGCCC AGCGGTTCTC ATGCTTTCAA CTGAAGCAGT CGGCGGTGAC
CCTATGTCGG TTATCCCGGC AGCCGTTGCA CTGGAACTGG TCCACAATTT CACCCTTGTT
CATGATGATA TCATGGACAA TGACGATGTA AGACGCGGAA TGCCTGCTGT CCATGTAAAG
TGGGGAAGTG AAGGTGCGAT CCTTGCAGGA GATACTCTTT ATTCAAAAGC TTTTGAGATC
CTTTCCGTAA TGGAAAAAGA TCCTGAAAGG ATTCTGAAAT GTGTTGCACT TCTTTCCAGG
ACCTGCACTG AGATATGTGA AGGTCAGTGG ATGGATATCG AGTTTGAGAA CCGCGATACA
GTTTCAGAAG AAGAGTATCT TGAAATGGTC GAAAAGAAGA CCTCGGTGCT TTATGGTGCA
GCAGCTAAAG TAGGTGCACT TCTGGGAGGA GCTTCCGATG AGGTTGCTGA TGCTATGTAT
GAGTTCGGTC GTCTTGTTGG GATCAGTTTC CAGATACAGG ATGATGTCAT CGATATGGTA
ACCCCTGAAG ATATCCTCGG TAAGGTCAGG GGCAGTGATC TCATTGAAGG AAAGAGGACT
CTGATAGCTA TCCATGCACT CAATCATGGT GTCGAACTGG AAATATTCGG CAAGGGCGGT
TCAGTTTCTC CAGAACAGAT AGATGAAGCG GTTTCTATCC TCGAAGATTC TGGTTCAATA
AAATATGCAC AGGACCTTTC CACAGAAACA CTTGAGAGGG GTAAGAGAAT GCTCGATATC
CTTGGTGATT CCGAAGCAAA GGAAATTCTT CTTGCTGTTG CAGATTATAT GGTGACCCGA
AATTATTGA
|
|---|
| Protein sequence | MDLMDEIKKR SVYVDKGIGE FLPISHPEEL YRASRYLPDA GGKRLRPAVL MLSTEAVGGD
PMSVIPAAVA LELVHNFTLV HDDIMDNDDV RRGMPAVHVK WGSEGAILAG DTLYSKAFEI
LSVMEKDPER ILKCVALLSR TCTEICEGQW MDIEFENRDT VSEEEYLEMV EKKTSVLYGA
AAKVGALLGG ASDEVADAMY EFGRLVGISF QIQDDVIDMV TPEDILGKVR GSDLIEGKRT
LIAIHALNHG VELEIFGKGG SVSPEQIDEA VSILEDSGSI KYAQDLSTET LERGKRMLDI
LGDSEAKEIL LAVADYMVTR NY
|
|---|
| |