| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_2345 |
|---|
| Symbol | rps15p |
|---|
| ID | 3998926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 2474969 |
|---|
| End bp | 2475427 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637960069 |
|---|
| Product | 30S ribosomal protein S15P |
|---|
| Protein accession | YP_566949 |
|---|
| Protein GI | 91774257 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00000536573 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA TGCATACCCG TACAAAAGGA AAATCCGGTT CAACAAAACC GATCAGATCA
GAATCACCAG CATGGTCCAC AGCAACAACA GAAGAGATTA CAAAAGTAGT ACTTGACCTC
TGGAAACAGG GCAACTCTAC AAGTGTAATT GGAATGGTAC TCAGAGACAA CTATGGTGTA
CCTGACGTTA AACTCGCAAC AGGAAAGAAG GTAACAGAAA TCCTGAGAGA CAACAGCGAG
GAACCAAACG TACCTGAAGA CCTCTACAAC CTAATTGTAA AGGCTATCGG ATTGCGTAAA
CACCTTGTAG TTAACAACAA GGATGTACAC AACAAGAGAT CATTGCAGTC AGCTGAATCA
AAGATCAGAA GGCTCGTGAA ATATTACCAG TCTACAAAGG TACTCCCTAT TGACTGGAAA
TACAAACCAG AAACTGCAGA AATGTTGATC ACAAGATAA
|
|---|
| Protein sequence | MAKMHTRTKG KSGSTKPIRS ESPAWSTATT EEITKVVLDL WKQGNSTSVI GMVLRDNYGV
PDVKLATGKK VTEILRDNSE EPNVPEDLYN LIVKAIGLRK HLVVNNKDVH NKRSLQSAES
KIRRLVKYYQ STKVLPIDWK YKPETAEMLI TR
|
|---|
| |