Gene Mbur_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_2303 
Symbol 
ID3998882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp2430664 
End bp2432646 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content45% 
IMG OID637960027 
Productexcinuclease ABC subunit B 
Protein accessionYP_566909 
Protein GI91774217 
COG category[L] Replication, recombination and repair 
COG ID[COG0556] Helicase subunit of the DNA excision repair complex 
TIGRFAM ID[TIGR00631] excinuclease ABC, B subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGTT TTGAGCTTGT GTCTGACTAT GAACCTAAAG GTGACCAACC GGAAGCTATC 
AGGAAGCTAT CCGAAGGTCT GAATAAAGGT CTGAAACATC AGGTCCTGTT GGGTGTTACA
GGTTCTGGAA AGACCTTCAC GGTCGCGAAT GTTATACAGA ACGTGCAGAA GCCCACTCTT
GTGATCGCAC ATAATAAAAC ACTTGCTGCA CAGCTTTTCT CTGAGTTCCG TGAATTTTTT
CCTAATAATG CAGTTGAATA TTTTGTAAGC TATTATGATT ACTATCAGCC GGAAGCTTAT
CTTCCTACCA CAGATACGTA CATCGAAAAA GATTCTTCTG TGAACGAAGA GATCGATCGT
TTGCGTCTGT CGGCTACAAA ATCCCTCATT GAACGCAAGG ATGTTATTGT GGTCTCCAGT
GTTTCAAGTA TCTACAACAT CGGTTCTCCT GATGAGTGGA GAAGAATGTC TGTAATTCTC
CGTACGGGTG ATGAGGTCGG TAGAAGTGAT CTTTTTGCCG CACTCATCAA TATCCACTAT
GAGCGCAATG ATATCGAATC TGCCAAAGGA TCTTTCCGGT CCAAGGGTGA TACCATTGAG
GTTTTTCCTG CGCAGGATAA TCATGGTGTG CGGATAGAAC TATTTGGGGA TGAGATCGAT
AGGATATCTT CCTTCGACCC AGTGACAGGA AAGACTATTG ATGAGGTTAA GGAAGATAAT
AGTATTGTCA TTTATCCTGC AAAACATTTT GTGATGCCGC AGGAAGAAAT GGTCAAGGCA
CTTGGTTCTA TTGAAAAGGA ACTTGAAGGG CAGGTTGCAA AACTGGTATC AGAGAACCGT
ATTCTTGAGT CGCAGAGACT TACGCAACGG GCAAAGTTCG ATCTGGAAAT GATTCGTGAG
CTTGGATATT GCAGTGGTAT TGAAAATTAT TCCCGTCACT TTGACGGACG CAAGCCGGGT
GATCCTCCTT CATCTCTGCT TGAATTCTTC CCTGATGATT TTTTGCTTGT TATCGATGAG
TCCCATGTGA CCATTCCTCA GATCCGGGGA ATGCATAATG GGGATCGTGC CAGAAAAGAG
GCACTCATCA ATTATGGATT CCGTCTTCCT TCTGCTTACG ATAATAGGCC GTTGACCTAC
AACGAGTTCC ATCATAAGAT AAACCAGGCC ATCTATGTGT CAGCTACACC TGCGGATTAT
GAACTCGGGA TCAGCAGTGC TGTCGTGGAG CAGATAATCA GGCCGACAGG TCTTGTTGAC
CCTGTGGTGT TCATTCGCCC GGTGGAGAAT CAGATCGATG ATCTTATCGG TGAAGTTAAT
AAGGTCACTG AGAAAGGATA TCGCACCCTT GTCACAACGC TTACTAAAAG AATGGCTGAG
GATCTGACCG AGTATCTGCT GGAAATGGGT ATTAGGGTGC GGTATATGCA TTCTGATATT
GACACTCTTG AGCGGGCAGA GATAATCCGT GATCTGCGAA AGGGTGTGTT CGATGTTCTG
GTGGGTATCA ATTTGTTAAG AGAGGGTCTG GATATACCTG AAGTGGCCTT TGTAGCTATC
CTTGATGCTG ATAAAGAAGG TTTCCTGCGT TCGGAAAGGT CGCTTATACA GACAATGGGG
CGAGCTTCAA GGAATGCGGA TGGATATGTG ATCCTTTATG CTGGCAAAGT TACCGGTTCC
ATTGAGGCTG CTTTGAGAGA AACTAACAGA AGGCGACAGA TCCAGCTTGC ATATAATGAG
AAACATGGCA TAGTTCCGCA GACCATCCAC AAAGCTCTCC AAAGAGAACT TGTTGAAACA
GAATATGGTG AGGTCGTATC TGAAGTTCTT GGGGTTGCAG AAGACCTTTC TGATATCGAG
ATCGCTGATA TGGTCATCGA ACTTGAAGCG GAGATGCACC TGGCTGCCAA AAATCTGGAA
TTTGAAAGGG CAGCGGCGTT GCGTGACAAC ATAAAGGAAC TCCGTAGCAC GTATTCTCTT
TAA
 
Protein sequence
MSGFELVSDY EPKGDQPEAI RKLSEGLNKG LKHQVLLGVT GSGKTFTVAN VIQNVQKPTL 
VIAHNKTLAA QLFSEFREFF PNNAVEYFVS YYDYYQPEAY LPTTDTYIEK DSSVNEEIDR
LRLSATKSLI ERKDVIVVSS VSSIYNIGSP DEWRRMSVIL RTGDEVGRSD LFAALINIHY
ERNDIESAKG SFRSKGDTIE VFPAQDNHGV RIELFGDEID RISSFDPVTG KTIDEVKEDN
SIVIYPAKHF VMPQEEMVKA LGSIEKELEG QVAKLVSENR ILESQRLTQR AKFDLEMIRE
LGYCSGIENY SRHFDGRKPG DPPSSLLEFF PDDFLLVIDE SHVTIPQIRG MHNGDRARKE
ALINYGFRLP SAYDNRPLTY NEFHHKINQA IYVSATPADY ELGISSAVVE QIIRPTGLVD
PVVFIRPVEN QIDDLIGEVN KVTEKGYRTL VTTLTKRMAE DLTEYLLEMG IRVRYMHSDI
DTLERAEIIR DLRKGVFDVL VGINLLREGL DIPEVAFVAI LDADKEGFLR SERSLIQTMG
RASRNADGYV ILYAGKVTGS IEAALRETNR RRQIQLAYNE KHGIVPQTIH KALQRELVET
EYGEVVSEVL GVAEDLSDIE IADMVIELEA EMHLAAKNLE FERAAALRDN IKELRSTYSL