Gene Mbur_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_2233 
Symbol 
ID3998845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand- 
Start bp2349114 
End bp2349665 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content38% 
IMG OID637959961 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_566846 
Protein GI91774154 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTA TAGATACAAA GATAGAAGAC CTATATATCC TTAAACCAAA GGTTTTCGGT 
GATGAAAGAG GATACTTTTT TGAAAGCTAC AATGCGAGAG TACTCGATGA ATTGGTTGGA 
AAAAAGTACA ATTTCGTTCA GGATAATGAG TCCAGATCAT CCTATGGAGT GATACGAGGT 
CTTCACTACC AGTTAGAACC CTACAGCCAG ACCAAACTCG TCCGTGTGAT TCAAGGAACC 
GTTTATGATG TGGTCGTAGA CCTTCGAAAA GAGTCTTGTA CGTTTGGTGA GTGGGTTGGT 
GTTGAACTCT CAGAGGATAA TAAAAAACAA TTTTTAATTC CAAAGGGGTT TGCACACGGT 
TTCTCTGTGT TGAGTGAAAC TGCTATATTT GCTTACAAAT GTGACGATTA TTATAATCCA 
GAATCAGAAG GCGGCATTAT GTATGATGAT CCCACACTCA ACATCGACTG GAAGGTCAAA 
AAGGAAGATG CCATAGTAGC TGACAAAGAC AAAGAATTGC CCACATTTGA AAATACTAAA 
ATTTCGTTTT GA
 
Protein sequence
MEFIDTKIED LYILKPKVFG DERGYFFESY NARVLDELVG KKYNFVQDNE SRSSYGVIRG 
LHYQLEPYSQ TKLVRVIQGT VYDVVVDLRK ESCTFGEWVG VELSEDNKKQ FLIPKGFAHG 
FSVLSETAIF AYKCDDYYNP ESEGGIMYDD PTLNIDWKVK KEDAIVADKD KELPTFENTK 
ISF