Gene Mbur_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_2164 
Symbol 
ID3997021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp2274560 
End bp2275219 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID637959897 
ProductDNA-(apurinic or apyrimidinic site) lyase / endonuclease III 
Protein accessionYP_566783 
Protein GI91774091 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG ATTCTCCGGC GATAGCGATG GACAATACTG CAAACTTTGA TCGTATATGG 
TCTATCCTGA AAAAAGAATA TCCTGACCCT CAACCTGAGC TGGATTACAG CAATGAGTTC
GAGCTTTTGA TAGCTACTAT CCTTTCAGCA CAGTGTACCG ATGTGCAGGT CAATAAAGTG
ACAAATGAGC TGTTCAGGAA ATACACGAAT GTGGAGGCTC TTGCAGCGGC TGATCTGGAC
GTGCTTGAAA AAGAGATATA TTCCACCGGT TTTTACCGTG CTAAATCGAA GAACATCAAA
AGGACATCTC AACTGATACT TTCTGATTTC AATGGCAAGG TGCCTGACAC AATGGAAGAA
CTTACAACCT TTCCGGGAGT TGCCCGAAAG ACGGCCAATA TCGTTCTTGC AAGGGGATTC
GGCAAGGTGG AAGGCATTGC AGTGGATACG CATGTGAAAA GGGTTTCTGG AAAGTTGGGG
CTTACTGAGA ACACTGACCC GAAGAAGATA GAACAGGACC TTATGAAGCT TGCAGAACAA
AAGGACTGGG AAGATCTGTC AATGACACTC ATACTTCATG GACGCAGGGT ATGTGATGCA
AAAAAACCTC AGTGTATCGT TTGTCTGCTT TCGAAGCTAT GCCCTTCGAG TCTGGTTTGA
 
Protein sequence
MNKDSPAIAM DNTANFDRIW SILKKEYPDP QPELDYSNEF ELLIATILSA QCTDVQVNKV 
TNELFRKYTN VEALAAADLD VLEKEIYSTG FYRAKSKNIK RTSQLILSDF NGKVPDTMEE
LTTFPGVARK TANIVLARGF GKVEGIAVDT HVKRVSGKLG LTENTDPKKI EQDLMKLAEQ
KDWEDLSMTL ILHGRRVCDA KKPQCIVCLL SKLCPSSLV