| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_2024 |
|---|
| Symbol | |
|---|
| ID | 3996977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 2128652 |
|---|
| End bp | 2129605 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637959763 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_566651 |
|---|
| Protein GI | 91773959 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0133215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA ATAATAGTGT TATATTAATT ACAGGTGGTG CAGGCTTTAT AGGTAGTCAT
GTTGTTGATA AGTTAATAAA TATTGGCAAC CGAGTTATTG TGTTTGATAA CTTGAGTTCT
GGTAATTTAG AATATATTGA TCAACATCTT GATAATCCAA ACTTTACATT TATTAATGGT
GATTTGCTCG ATACAGATAA AATAACGAAA GCATGTCATA ATATAGATTG TGTTTATCAT
ATTGCAGCAA ATCCAGATGT AAGATTAGGG TTCTCAAATA CCAAGGTACA TTTTGATCAA
AATATTACTG CTACTTACAA TCTTCTTGAA GCTATGCGTA AAAATAACAT TAGAAATATT
GTGTTTACTT CCACATCAAC AGTATATGGG GAAGCATCGA TTATTCCCAC GCCTGAAAAC
TATGGTCCAC TTGTTCCGAT ATCACTTTAT GGGGCATCGA AACTTTCGTG TGAAGCCTTA
ATAACTTCGT ACTGTCATAC ATTTAATATG AGGTCATGGA TATTTAGATT TGCAAACATT
ATTGGAGAGC GCAGTACTCA CGGTATTATA TTTGATTTTA TCAAAAAACT TCACAATAAT
CCTGATCAAC TTGAAATTCT TGGTGATGGG CAGCAATCAA AATCATATTT GCATATTAGT
GCTTGCATTG ATGCAATTTT ATTTGTAGTT AATAAAAGTC TAGACGATGT TAATATTTTT
AATATTGGCT CAGAAGACAC AATTAACTCA ACACAAATTG GTATGATCGT TGTTGAGGAA
ATGGGGCTTG AAAATGTTGA ATTTACATAT ACTGGTGGTA CGAGAGGATG GAAAGGGGAT
GTTCCACGAA TGTCACTTTC AATTGATAAA TTAGAATCTC TTGGATGGAG TTTGAGTTGT
TCTTCTAAGG GAAGTGTAAT AGAAACAGTA CGTTCATTGT TATCTACAAT TTAA
|
|---|
| Protein sequence | MFENNSVILI TGGAGFIGSH VVDKLINIGN RVIVFDNLSS GNLEYIDQHL DNPNFTFING
DLLDTDKITK ACHNIDCVYH IAANPDVRLG FSNTKVHFDQ NITATYNLLE AMRKNNIRNI
VFTSTSTVYG EASIIPTPEN YGPLVPISLY GASKLSCEAL ITSYCHTFNM RSWIFRFANI
IGERSTHGII FDFIKKLHNN PDQLEILGDG QQSKSYLHIS ACIDAILFVV NKSLDDVNIF
NIGSEDTINS TQIGMIVVEE MGLENVEFTY TGGTRGWKGD VPRMSLSIDK LESLGWSLSC
SSKGSVIETV RSLLSTI
|
|---|
| |