Gene Mbur_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_2016 
Symbol 
ID3996968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp2120522 
End bp2121640 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content42% 
IMG OID637959755 
Producttransposase 
Protein accessionYP_566643 
Protein GI91773951 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTGG ATAGAACTAT CAAACTGAAA CTGGAGATGT CTGACGAAGG CAAAGAAAAT 
CTCAAGCAAA CAGTTGTGCT TTTCAACCAG GTTTTCAACG AGGTTGCTGA ATATGGTTTC
AACAACCATA CTCATAGCAA GGTATCTATC CATCATGCTA CTTACAAAGA CATTAGAGAA
CAGCACCCTG AACTGCCGTC TTCGTTGGTC CAGGGTGCAA GAGACGTTGC GTGCGAAGCT
CTCAAAGGTG TCAAACTTAA GACATGTCCA GAGAGTCAGC CGTACTCGGC GATCAGGTAC
AATAAGAGAG TTGTTACGAT TCACATGCAG TACAACAGTG CTACGATTGC ATCCATCCAC
GGCCGAGTAA ATATCTCTTT CAATATACCT GAATACTACA AACAGTATCT TGGATGGGAA
ATTAGGAGTT CCACGCTTAG GTATGACCGC AGACAAGATG TTTTCTATCT GCATGTCACA
CTTCGTACTG AATCTCCTAA ACCGGTCGGC AATACTATTC TTGGTATCGA TCGAGGGATT
GTCAATGTCG CGGTTTGTTC CAATAATGTT TTTTTCAATA CGAGTAGCAT CAAAAATACA
AGAGCTAAAT ATGCATATCT CAGGAAGGAA CTCCAGTCCA AAGGCACCAA ATCTGCTAAA
CGTCTTCTTA AGAAGATCAG CAGAAAGGAA AGACGGTTTG TGACTGATGT TAACCATTGT
ATTGCCAAAG ATATTGTCAA TATGCCCTTT GATGTGATCG CTCTTGAAGA CTTGACCAGC
ATTCGCGTTC AGAAACGCAA AGGTAAGAAC TTTAACAGAA AACTCAACAA TTGGAGTTTC
TACCAACTTG AACAATTTAT ACGCTACAAA GCCGAAGCTG TGGCTAAACA AGTTGTTTCG
GTTGACCCCA GATATTCCAG TCAAAAATGT TCCAAATGTG GACACATTTA CAAAGGGAAT
CGGGATGGGA GTTCTTACCG TTGTCGCAAT TGTGGATTTC AAATACATGC TGATCTCAAT
GCTGCTCGAA ACATAGCTCA GGCAGGTATA TCTTGCCTGA GTAGGCTGAC TGTCAACCAG
CCAAATGTAG GGTTGAAAGT TCCACTAGAT GCAACTTAA
 
Protein sequence
MNVDRTIKLK LEMSDEGKEN LKQTVVLFNQ VFNEVAEYGF NNHTHSKVSI HHATYKDIRE 
QHPELPSSLV QGARDVACEA LKGVKLKTCP ESQPYSAIRY NKRVVTIHMQ YNSATIASIH
GRVNISFNIP EYYKQYLGWE IRSSTLRYDR RQDVFYLHVT LRTESPKPVG NTILGIDRGI
VNVAVCSNNV FFNTSSIKNT RAKYAYLRKE LQSKGTKSAK RLLKKISRKE RRFVTDVNHC
IAKDIVNMPF DVIALEDLTS IRVQKRKGKN FNRKLNNWSF YQLEQFIRYK AEAVAKQVVS
VDPRYSSQKC SKCGHIYKGN RDGSSYRCRN CGFQIHADLN AARNIAQAGI SCLSRLTVNQ
PNVGLKVPLD AT