| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1998 |
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| Symbol | |
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| ID | 3996950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | - |
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| Start bp | 2099481 |
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| End bp | 2100290 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637959739 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_566627 |
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| Protein GI | 91773935 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA TATTTGCAGT CCTTGGGGAT CCCATAGAAC ATTCACTATC ACCCATCATG
CACAATTCAG CATTCGAAGC CCTGGACATG GACTGCACAT ACCATGCATT CCGAGTTGAG
AAGAACGACC TTGAAAACGC ACTGCAGGGT GCAAAGGCCA TGGGATTCGG AGGATTGAAC
CTCACAGTGC CCCTCAAAGA GACCGCTCTC AAATTCGTTG ATGCAGATTC CCTTGCTGCA
AAGATAGGTG CCATAAACAC CATTGACTTC AAGGACGGTA TTAAAGGCTA CAACACTGAC
GGCATTGGTG CAAAACGAAC TATCGAGGAT GAAGGTGTCG ATATCAAGGA CAAGAATGTC
CTGATCCTCG GAGCAGGCGG TGCTGCAAGA GCCATCGCAT TCACATTTGC AGAAGCAGGA
GCAAATGTGA ACATTGCCAA CCGAACCCCT GAACGTGCCA TGCAGCTCGC TGCAGAGATA
GGAGATGCAA AAGGATACGG TCTTGATATC GTTGACAATG GGCTTGAAGA TATTGATATT
CTTATCAATA CCACCACAGT AGGACTGGGC AATTCCAATG GGACCCTTGT GACCGCAGAG
CAGATGCATT CAGACCTTGC AGTTTTTGAT ATCGTTTACA ATCCGCTTAT GACAAAACTG
TTGCAGGAAG CAGAGACCGC AGGTGCAAGA CCTATCACAG GCATTATGAT GCTAGTATAC
CAGGGAGCGG AAGCCTTCCG CATATGGACT GGAAAAGAAC CACCCATAAA TGTCATGAAA
AAAACTGTCA TGGAGACATT GGACATATGA
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| Protein sequence | MKKIFAVLGD PIEHSLSPIM HNSAFEALDM DCTYHAFRVE KNDLENALQG AKAMGFGGLN
LTVPLKETAL KFVDADSLAA KIGAINTIDF KDGIKGYNTD GIGAKRTIED EGVDIKDKNV
LILGAGGAAR AIAFTFAEAG ANVNIANRTP ERAMQLAAEI GDAKGYGLDI VDNGLEDIDI
LINTTTVGLG NSNGTLVTAE QMHSDLAVFD IVYNPLMTKL LQEAETAGAR PITGIMMLVY
QGAEAFRIWT GKEPPINVMK KTVMETLDI
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