| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1908 |
|---|
| Symbol | |
|---|
| ID | 3997700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 2001212 |
|---|
| End bp | 2002144 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637959651 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_566540 |
|---|
| Protein GI | 91773848 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4052] Uncharacterized protein related to methyl coenzyme M reductase subunit C |
|---|
| TIGRFAM ID | [TIGR03274] putative methanogenesis marker protein 7 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG TACTTGAACC GTATATCTAT GAAGGTGGGA TTCACAAACA TAGTCTGATC
CTTGAGCTTC TGGAAGATCT TGGTGGCTAT CTCGTTCAGA AGACGCCTGC TTCAACAGAG
ATCACGCTAG TTATGCTCAT TCCGAAAAAA GATGTCCATC TGGTCGAGGA TGTTTGTATA
AAACTTCTTG GTAAGCTGAC CTCGGCACCG CTTACGGGTA CTGAGGTAGC GGTAGTGTCT
CCTACACTTG CATCACATCA TCTTCCACAT TCTGCTTGTG ATATTGCGGA ATACCTCCGC
CGTGGAGGGG CTAATACCAA TATGATCGGG CTTGCAAGGG GGATGGGCCG AAGGGTTGCA
CTATCTGCTG ATTATGAGAG AAGGCTCATC AATGAGCATG ATGTTGCTGT TTTCTCTTTC
GGGATTTTCA AAGATTGTAT CATTAACAAG AAGCCAAAGT TGTTTGAAGG TATCGAGATA
CCTATAGTGG TGACCGGTGG GCCTGATATT CGGACTGAGG AAATTTCCGG GGCTGACATA
TATGTTGGTG GTATCGGGCG TGTTGCTCAC AGGATGAGGA AAGGTCCTGA ACTGGATGCA
ATGGACGTTC TGAACGAAAA GGTGGGTGAG ATCGTAAATC TCAAGAGGGA AAGTATTGCA
AAGGATCCGC TTGCAGTTCT TCCTGCAAGG CTAATGAAAG AGGTTCAGGA GCAGGTTCCT
GTCATTCTGA GTGTGTTGAC GCCTGCCCCG ATCACGCTTC AGCTTGACGG CATGAGGATA
AAACTACCTT ATGATCGATA CCGTGATGCT GTCGGAAATA TCGAGTTCGA TGAAGGCTTC
CTCCTTTCGG ATGTTGCAAA CATCCTTCCT TCTAAGATGA AGGATTACAT TCTTGTAAAG
ATAAAACGCA GGTCTGAGGT AGCAAATATT TAA
|
|---|
| Protein sequence | MAAVLEPYIY EGGIHKHSLI LELLEDLGGY LVQKTPASTE ITLVMLIPKK DVHLVEDVCI
KLLGKLTSAP LTGTEVAVVS PTLASHHLPH SACDIAEYLR RGGANTNMIG LARGMGRRVA
LSADYERRLI NEHDVAVFSF GIFKDCIINK KPKLFEGIEI PIVVTGGPDI RTEEISGADI
YVGGIGRVAH RMRKGPELDA MDVLNEKVGE IVNLKRESIA KDPLAVLPAR LMKEVQEQVP
VILSVLTPAP ITLQLDGMRI KLPYDRYRDA VGNIEFDEGF LLSDVANILP SKMKDYILVK
IKRRSEVANI
|
|---|
| |